| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0535 |
|---|
| Symbol | |
|---|
| ID | 6331731 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 547456 |
|---|
| End bp | 550182 |
|---|
| Gene Length | 2727 bp |
|---|
| Protein Length | 908 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642656823 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001930729 |
|---|
| Protein GI | 188996478 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3868] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000617771 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGATACA CTATCAGACT TTTATGCTTA TTTAATATTT TATTTATATT TAATCTATCT
TACGGAAAAG ATATAAGCGT TGGGTTTATA TACAGAGAAC CACCTGAAGA GGCATTCTAC
CTTTATGACT GGCTTGTGGT TGACCCGGAT AACTTTTCTT TTGAAAAACT TAAAGAAAAA
TACTACATAA AAAATAAGAA AGCAAAACTT TTTGCGTATG TATCCGTAGG AGAAATAGAG
CCTTACAGAA AGTATTATAA AGAAATGGAT AAAAGCTGGA TAGCAGGAGA AAATAAGGAC
TGGAAAACCT ACATAGCAGA TATTAGAAAA AAAGAGTATA GAGAATTTCT AATAAACAAA
GTCTTAAAAA GCCTTTCTCA ATACGATGGA TTTTTCTTTG ATACCTTAGA TAGCTATCAA
ATTGCATTAA AACCAAATGA ATATAAAGAT TATGAAAATG CCTTGGCTGA GTTTATCATT
CAAGTGAAAA AATCATTCCC GGACAAAAAA ATCATTCTAA ACAGAGGTTT TGAAGTAGTT
CCACAAGTAA AAGATTATAT AGATGCAGTA GTTGCAGAAA GCCTATTCTA TGGTCTTGAT
ACCAAAACAA TGAAGTATAA AAAAATGAAA GAAGAAGATG CAAGATGGCT TTTAAACAAA
CTAAATGAGA TTAAAAACCT TGGTGTCAAA GTTATCGTGA TAGATTATGT AGACCCTAAA
AACAAAAAAT TACAAAAAGA AGTTGCTAAA AAAATATACG AAAATGGGTT TATCCCATAT
ATTACAGATA AAGACCTAAA AACTCTTGGA ACAAGCATAT ATCAAATTAT TCCAAGAAAA
ATTATGATTT TGTATAATTC TAAAGAATTT GATGCAGCAT ACGATGATTT ACATAGAAAT
TTCCAAGCTT TCTTAGAGTA TCTTGGATAT GTTCCGGTTA TGTATGATAT TAATAAAGGG
CTTCCAAGAG ATTATATTGG AGATGAGTAT GCCGGGATAC TACTGAGGCA AGCAGAATAT
TCGCCAGAGA TGTTGCAGTG GCTAAAAAAA CAGATTTCAG ACGGAATTAA AGTATTCTTC
CTAAGCTACA TTCCATCAGA TGAAGAATTT TTAAGCTTTC TTGGTCTAAA AATAGAAGGG
AATACATCCA TTTTTGATAA AGTTGATTTT GAACCTATAG GTTATGATTA CTTTGAGATA
AAACCGGAAA TCCAACCAAT TCCAATAACA ACACCACAAA ATAATTTCAA GCCTATTTTG
AAAGCTAAAA TAAATGGCAA GGAGTTTTAT CCTTTTGCAA TTACAGATTG GGGTGGATAT
GCTTTAGAAG GAACTTTTTT ATCAGAATCT GGAAAGAATG AACTTTTGGT ATTTAATCCG
GTTGAGATTT TTAGAGACGT TTTTAAACCA GATTTTCCAA CACCGGATGT AACAACCGAG
AACGGAAATA GAATCTTAAC AGCCCATATA GATGGAGATG CGTTTTTTGG TGTTGCTGAC
TTTGACCCAC AAAAAAATTT AGGAGAGATA ATCAGAGATG AGATAATAAA AAAATACAAA
ATTCCACATA CTGTTTCTAT AGTTGAAGGA GAAATTGCAC CTTGGGGTTT GTATCCGGAT
AAAAGTAAAA AACTTGAAGA AATTGCAAGA AGTATATTTG CGTTAGAAAA TGTAGAGATT
GCAAGCCATT CATTTTCACA TCCTTTTAAG TGGAAAAAAT TGTATGAATT AGAAAAAGAA
AACAAAGAAA GTAATGTAGA AGGCTATAGT TTATCTATTA AAAATTATGA GTTTAATTTA
GAAAGAGAGA TTATTGGTTC TATAGATTAT ATCAATAAAA ATTTAGCTCC GGAGAATAAA
AAGACAAAAG TTTTTTTGTG GACCGGCGAC TGTGTTCCTC CAAAAGAAGC GCTTCAACTA
ACATACAAGA TTGGTGTTTA CAACGTCAAC GGAGGAGACA CTTGGATAAA CTATCAAGAA
CCGTTTTATA CACTAATTGG ACCCATGGGG CTTAACAGGG ATGAATACTT TCAGGTATAT
GCACCTATAC AAAATGAAAA TGTATACACA AATCTTTGGA GAGATTATTA TGGATATATA
AAATCTATAT CAACCTTTAA ACTCACAGAC GAAAAATATA GATTTAAACC TATTTCTATA
TACTATCACT TTTACTCTGG GCAAAAAATA GCATCCTTAA AAGCTTTAAA GGAAGTTTAT
GATTATGCTT TATCTCAAGA AATAAACCCG ATGTTTTTAT CAGAGTATAC CCAAAGAGTT
TTAGAATTTA GAAATACAGT CGTTGCAAAG GATTTGGAAG ATAATTTTGT TATTAGAAAT
GAAGGAAATC TAAAGACTGT TAGATTTGAT AAAGATGTAA AGATAGATAT TTTTAAAAGT
CAAAATGTGG TCGGTTTTAG AAAAATTCAC GATTCAATCT ATGTTCATTT AACCAATGAT
GGAGATTCAA AAATTTTCTT TTCTGAAGAT GAGCCAAATT TTATGGTTAT AAATTCTAAT
GGTCAGATAA AGTTTTACGA AAAAGATAAT AAAAGTATAA AAATTAAACT TGAAGGCTAT
ATCCCATTAA CCTTTAAGAT TTTGAACAAA AACTGCAAGT TAAACATAAC TCCAAATGAT
TATATCCTAA AAAAAGACAG GAATTATTAT GAGTTTAAAT TCACGAAAGA GAAAGAAGCC
TATGTGGAAG CCCACTGCGG TAGCTAA
|
|---|
| Protein sequence | MRYTIRLLCL FNILFIFNLS YGKDISVGFI YREPPEEAFY LYDWLVVDPD NFSFEKLKEK
YYIKNKKAKL FAYVSVGEIE PYRKYYKEMD KSWIAGENKD WKTYIADIRK KEYREFLINK
VLKSLSQYDG FFFDTLDSYQ IALKPNEYKD YENALAEFII QVKKSFPDKK IILNRGFEVV
PQVKDYIDAV VAESLFYGLD TKTMKYKKMK EEDARWLLNK LNEIKNLGVK VIVIDYVDPK
NKKLQKEVAK KIYENGFIPY ITDKDLKTLG TSIYQIIPRK IMILYNSKEF DAAYDDLHRN
FQAFLEYLGY VPVMYDINKG LPRDYIGDEY AGILLRQAEY SPEMLQWLKK QISDGIKVFF
LSYIPSDEEF LSFLGLKIEG NTSIFDKVDF EPIGYDYFEI KPEIQPIPIT TPQNNFKPIL
KAKINGKEFY PFAITDWGGY ALEGTFLSES GKNELLVFNP VEIFRDVFKP DFPTPDVTTE
NGNRILTAHI DGDAFFGVAD FDPQKNLGEI IRDEIIKKYK IPHTVSIVEG EIAPWGLYPD
KSKKLEEIAR SIFALENVEI ASHSFSHPFK WKKLYELEKE NKESNVEGYS LSIKNYEFNL
EREIIGSIDY INKNLAPENK KTKVFLWTGD CVPPKEALQL TYKIGVYNVN GGDTWINYQE
PFYTLIGPMG LNRDEYFQVY APIQNENVYT NLWRDYYGYI KSISTFKLTD EKYRFKPISI
YYHFYSGQKI ASLKALKEVY DYALSQEINP MFLSEYTQRV LEFRNTVVAK DLEDNFVIRN
EGNLKTVRFD KDVKIDIFKS QNVVGFRKIH DSIYVHLTND GDSKIFFSED EPNFMVINSN
GQIKFYEKDN KSIKIKLEGY IPLTFKILNK NCKLNITPND YILKKDRNYY EFKFTKEKEA
YVEAHCGS
|
|---|
| |