Gene SYO3AOP1_0528 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0528 
Symbol 
ID6331308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp540320 
End bp540820 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content30% 
IMG OID642656816 
ProductShikimate kinase 
Protein accessionYP_001930722 
Protein GI188996471 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.276227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TATATCTTGT TGGATTTATG GGAAGTGGAA AGTCTACGGT AGGAAAGATT 
TTGGCAGAAA AATTAAATAT GAAATTTGTT GATATTGATA AGCTTATTGA AGAAAAAGAA 
GGAATGAAAA TAAAAGATAT TTTTGAGCAA AAAGGAGAAA GCTATTTTAG AGAGCTTGAA 
AGAAAACAGA TAGAAGCAAT AGTTAATCAA GAAGGACTTG TAGTTTCTAC CGGTGGTGGG 
CTTGGAGCAA ATTTGAACAA TATGAATTTG ATGAAAAAAA ACGGAGATGT TGTGTGGCTT 
GATGTTAGTT TAAACACAGT CTTAGATAGA CTAAAAAACG ACCAAGACAG ACCATTATTA 
AAACAACCTA TAGAAAAAAT AAAACAGCTT TTTGAAGAAA GGAAGAATGT ATACAGACTT 
GCAAACATAA GGATCAATGC AGACAAAAAA ACACCAAGCC AAATTGTAGA AGAAATTTTA 
ACAAAAATAA AAAGGAGATA A
 
Protein sequence
MKNIYLVGFM GSGKSTVGKI LAEKLNMKFV DIDKLIEEKE GMKIKDIFEQ KGESYFRELE 
RKQIEAIVNQ EGLVVSTGGG LGANLNNMNL MKKNGDVVWL DVSLNTVLDR LKNDQDRPLL 
KQPIEKIKQL FEERKNVYRL ANIRINADKK TPSQIVEEIL TKIKRR