Gene SYO3AOP1_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0516 
Symbol 
ID6331174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp528165 
End bp528632 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content41% 
IMG OID642656804 
Productsulfur oxidation protein SoxY 
Protein accessionYP_001930710 
Protein GI188996459 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.000407688 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAA GAGAGCTTTT AAAAGGAGCA GCGTTGGCTG TTTCCAGTCT AACGTTCGGC 
AGCTCATTGT TATCTAATGT CTTTGCTGTT GAGCTTGCAG ACGCACCACC ACCAAAAAAA 
CCTTATGAAG AAGCATTAAA AGAAATTACC GGCGGAAAAA CAGTTGCTGA TTCAGACAAA 
GTAAAGCTTA TTGCTCCGGA GATTGCAGAA AACGGGGCTG TTGTACCGGT TACTGTAGAA 
GTAGAACTAC CAATAGAGCA GATTAAAGCA ATTCATATTT TAGCAGATAA AAACCATAAT 
GCTCGTACGA TGAGCGTTGA GTTTACTCCG GCTAACGGAA AGGCTTACAT CTCGACAAGA 
ATAAGACTTG CAGAATCTAT GAACGTTGTC GCAATAGCAC AACTTGCAGA TGGTAGCTTC 
ATTAAAGCAC AGAAGCCTGT AAAAGTTACA ATAGGCGGAT GTGGATAA
 
Protein sequence
MNRRELLKGA ALAVSSLTFG SSLLSNVFAV ELADAPPPKK PYEEALKEIT GGKTVADSDK 
VKLIAPEIAE NGAVVPVTVE VELPIEQIKA IHILADKNHN ARTMSVEFTP ANGKAYISTR 
IRLAESMNVV AIAQLADGSF IKAQKPVKVT IGGCG