Gene SYO3AOP1_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0501 
Symbol 
ID6332165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand+ 
Start bp516292 
End bp516741 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content34% 
IMG OID642656790 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001930696 
Protein GI188996445 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTATC ATAAAAAATT TATAGACCAA GCAGTAAAAG AAGCAGAGAA AGCATTAAAG 
AAAAACGAAG TTCCAGTCGG TGCTGTCATA GTAAAAGACG GAAAAATAAT CTCAAAAGCC 
CACAATCAAA GAATTTCAAA AAATAATGCA TTGTATCATG CAGAAATCTT AGCAATAGAA 
AAATCCTGCA AAAAACTTAA AACTTGGCGT TTAGATGATG CGGTATTATA TACAACTCTT 
GAACCTTGCC TAATGTGTGC CGGTGCAGTA ATGCAGGCAA GGATTAAAAA GGTTGTCTTT 
TGTGCAAAGG ATGAAAAAGG CGGTGCGGTT TTAAGCAAAT ACACAGTTTT TGACGATAAA 
AAACTTCCAT TCAACGTTGA GTATGAATAC ATTCCGGATG AAAGATGTAG TAAACTTTTA 
AAAGAGTTTT TCAAAAAGCT TAGAGATTAG
 
Protein sequence
MNYHKKFIDQ AVKEAEKALK KNEVPVGAVI VKDGKIISKA HNQRISKNNA LYHAEILAIE 
KSCKKLKTWR LDDAVLYTTL EPCLMCAGAV MQARIKKVVF CAKDEKGGAV LSKYTVFDDK 
KLPFNVEYEY IPDERCSKLL KEFFKKLRD