Gene SYO3AOP1_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0499 
Symbol 
ID6332163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp513893 
End bp514549 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content37% 
IMG OID642656788 
Productisoprenoid biosynthesis protein with amidotransferase-like domain 
Protein accessionYP_001930694 
Protein GI188996443 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones107 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG GTGTTTTGCT GGCAGGTTGT GGAGTGTTTG ACGGTGCAGA AATCCATGAG 
GCAACCTTAA CATTATACTT TCTTGATAAA GCTGGTGTAG AGACTGTAAT CATGGCTCCA
AATATCAAAC AAAAGGATGT AATCAATCAT CTTACCGGCG AAACTATGAA TGAAGAAAGA
AACGTTCTTG TTGAAGCTGC AAGAATCGCG AGAGGAAACA TAAAAGATAT AAATGACGTA
AAAGCTGAAG ATATTGATGC TTTGATTATG CCTGGTGGAT ATGGTGTAGC TAAAAACTTT
TCTAACTTTT TAGAAAAAGG TGCTGAAGCT GATGTAATTC CTGAAGTTAA AAGGCTTCTT
GTTGATATGT TTAAAGCTGG AAAGCCAATA GGTGCTATCT GTATCTCTCC TGTTATTGTA
GCAGCAGCAT TAAGAGAAGC TAAACCAACT GTAACAATCG GAACAGATAT TGATGTAGCT
AAAACAATAG AAGACATGGG TGCAAGACAT TTAGCTTGTC CGGTTAACGA GATGGTGGTA
GATGAAGAGA ATAAAATCGT AACTACTCCT GCATACATGC TTGGAAAGAC AATAAAAGAC
GTTGCAGAAG GAATAGAAAA ACTTGTCAAT AAAGTAATTG AGCTTGTTAA AAAATGA
 
Protein sequence
MKVGVLLAGC GVFDGAEIHE ATLTLYFLDK AGVETVIMAP NIKQKDVINH LTGETMNEER 
NVLVEAARIA RGNIKDINDV KAEDIDALIM PGGYGVAKNF SNFLEKGAEA DVIPEVKRLL
VDMFKAGKPI GAICISPVIV AAALREAKPT VTIGTDIDVA KTIEDMGARH LACPVNEMVV
DEENKIVTTP AYMLGKTIKD VAEGIEKLVN KVIELVKK