| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0490 |
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| Symbol | |
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| ID | 6331205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 500183 |
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| End bp | 503341 |
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| Gene Length | 3159 bp |
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| Protein Length | 1052 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656779 |
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| Product | helicase domain protein |
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| Protein accession | YP_001930685 |
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| Protein GI | 188996434 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 87 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACA CAGACCTAAC TTTTATTACT AACCTACCCG GACAGACTTT AAAAGATAGA
TTTAATGCTC TGATTAAAGA TACGAGATTT TTTGATGTGT TAGTTGGTTA TTTCTACGTT
AGTGGTTTTT ATGCTATTTA TAAATCTTTG GAAAATACAG AAAAAATAAG AATTTTAATT
GGCATCTCTA CTACCAAACA AACATTCGAA TTGATTGAAA AAGGAAGACA TCTATCACAG
AAAGAAGCTA AGGAGTTAGT AGAAGAAGAA ATAATCAAAG AGTTTGAAGA CTCTGAAGAT
AAAAAAGAAG TAGAGGAAGG GGTTTTAAAG TTTGTTGAAT GGATATCAAC AGGAAAGTTA
GAAATCAGGG CATACCCTGA AAGAAATTTA CACGCAAAAT TATACATAAT GACCTTTAAA
GAAGGTGATC GGGACGTTGG CAGAGTTATT ACAGGGTCAA GTAATTTTAC ACAGAAAGGT
TTGGTAGAAA ATTTAGAGTT TAATGTAGAG CTTAAAAATA TAAGTGATTA CGAATATGCG
AAGAAAAAGT TTGAAGAGCT TTGGGAAAAT TCAGTAGAAG TTAGTGAAAA GTTTGCCCAA
ACCATAAAAA ACAAAACCTT TATAAATGAT TCTATAACTC CTTATGAGTT ATATCTAAAA
TTTTTGTATG AGTATTTTAA AGAAGAGTTA GATAGTACTC AGAATTTAGA TAATTCTTAT
TTACCTGAAA ATTTTAAAAA TCTTGAATAC CAAAGACAAG CTGTTTTAAA TGCAAAAAAA
ATAATAGAAG AGCATGGAGG CGTTTTTATC TCTGATGTTG TAGGTCTTGG AAAGACCTAT
ATGACTGCTA TGTTAGTCTC ACAGCTTGAT GGTAATACTA TGGTTATAGC ACCACCATCT
CTTTTAAGCA GAAGCAACCC CGGTTCTTGG GAAAACGTTT TGAGAGATTT TCATATTCCG
TTTAAAGCAA TATCCATAGG AAAGCTTGAA GAGGCATTAG AAGAGATAGA ATTTAGAGAG
TATAAAAACA TTATCATTGA TGAGTCACAC AGATTTAGAA ATGAATCTAC GGTTACATAC
GAAAAATTAG CTGAAATCTG CAGAGGAAAA AGAGTTATAC TTGTTTCAGC AACTCCTTAC
AACAACTCAC CAAAAGATAT TTTAGCACAG ATAAAGCTAT TTCAAAATCC CAGAAGAAGT
ACAATACCCG GTATTTTAGA TTTAGAAAGC TTTTTTAAAA AGCTTGAAGA TAGGCTAAAA
AAAGCAAAAA AGAGCCAAGA CCCGGAAAAG TTTGTAGAAG AATCCAAAGA AGTGGCAAGA
GAAATAAGAG ATAAAGTTTT AAAGTATATA ATGATAAGAA GAACCAGAAA GGATATAGAA
ACTTACTTTA AAGAAGACCT TGAAAGAAAT AATTTGAAAT TTCCACAGGT AAACGACCCG
ATCCCTGTTT TATACCAGTT GAATGAAAAA GAAGACAGTG CTTTTATGAA AACTGTTGAA
CTTATCGCCA AACATTTAAA CTATGCAAGA TACACACCTT TACTTTATTT AAAATCTCAA
ATAAATATCT TAGAAAAACA ATCTCAAAAA AATATGGCAT CTTTTATGAA AGTCCTACTT
GTAAAAAGAT TAGAAAGCAG TTTTTATGCT TTCAATAAAA CCTTAGATAG ATTTATAAAG
TCATACGAAG GCATGCTAAA TGCTATAAAT CAAAAAGGAA AAGTTTACAT AAGCAAAAAG
TTTTCAGACA AAATTTTGGA ATTCTTAGAG AGTGATAACG ATGAAGAGAT TGAAAAATTA
CTTAATGAAG GCAAAGCAGA AGAGTATGAT ATACATGATT TTACAGAAAG CTTTATAGAG
AACCTAAAAA AAGATTTGGA TATCTTAAAA CAGATAAAAT CTCTTTGGCA GGATACAGAA
AGAGACCCTA AGTTAGATGT TTTAATCCAA GAATTAAAAA ACAACCCAAT TTTAAAAGAC
AAAAAGATAA TTATTTTTAC AGAGTCAAAA GAAACAGCAG AATATCTAAC AGAAAACTTA
AACAAAATAT TTGATAACAA AGTTCTTTTA TTTCATGGTG GGTCTTCTGA AGAGATTAGA
GATAAAATCA TTGAAAACTT TGATGACAGG TCAAGAATCA AGAAAGATGA TTACAGAATA
TTGGTAACAA CTGATGTACT GTCAGAGGGT GTAAACCTTC ATAGGTCAAA CATCATTATA
AACTATGATA TACCATGGAA TCCAACGAAG ATTATTCAAA GGGTTGGAAG GGTTAACAGA
TTAGATACAA AGTTTGATGA GATTTATGTG TATAACTTCT TTCCAACTGC TCAGGTAGAA
GACCAGATAA AATTAAAGCA GATAGCCCGC TCTAAGGTAG AAGCTTTCTT GAACCTGCTT
GGCGGTGATG CTGCAATTCT AACAGAAGGG GAGTCTGTAA AATCTTATGA GCTTTTTGAT
AAATTAACAT CAAAAAATTT CTTAACAGAT GAAGACTTTG AAGAAAGTGA GCTTAAATAC
TACAGAATAA TAGAAAAAAT AAGAGATGAG AACCTGGACT TATTTGATAA AATTAAACAA
CTTCCGAAGA AAGCAAGAGC AGGGAAAAAA GCAGAAAATA TAACCAACGC ACTTTTGACA
TTTTTCAGAA AAGGAAAGTT GATGAAGTTT TATCTATCAG ATAAAAATAT AACGCAGGAA
TTAGACTTTT TAACTGCTGT CAAGTTTTTT GAATGTGATG AAAGCCAGCA AAAAATAAAC
ATTCCAATTG AAGAGTTTTA TAACCTTCTT GAAAAAAATA AAAAGGAATT TATCAATGCA
ACTTATGAAG AAGAGTTTAT TCATCATAAA CCGGGTAAAG ACAGCAGTAA AGAGCTATTA
AAACATATAA AAGCTATTTT TAAAGACAGG AAAAAACTAA CAGAAGAACA AGAAAAGTAC
ATAGATTTGA TATCTGAAAG AATTAAAGAG GGAGCTTTAC CAAAAAAGAC AGTTCAAAAA
GCTCTAAAAG CTATAAAATA TATTGAAGAC CCGTTAACAG CAATATCTGT ATTGAAAGAT
GAAATACCAA AAAATTTAGT TTATAAACAA CATTTAGGTG TGATGCTAAA TCAAGGTCAT
AAAAGAGAGG TTATACTATC ACTGTATTTA GGAGCTTGA
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| Protein sequence | MNNTDLTFIT NLPGQTLKDR FNALIKDTRF FDVLVGYFYV SGFYAIYKSL ENTEKIRILI
GISTTKQTFE LIEKGRHLSQ KEAKELVEEE IIKEFEDSED KKEVEEGVLK FVEWISTGKL
EIRAYPERNL HAKLYIMTFK EGDRDVGRVI TGSSNFTQKG LVENLEFNVE LKNISDYEYA
KKKFEELWEN SVEVSEKFAQ TIKNKTFIND SITPYELYLK FLYEYFKEEL DSTQNLDNSY
LPENFKNLEY QRQAVLNAKK IIEEHGGVFI SDVVGLGKTY MTAMLVSQLD GNTMVIAPPS
LLSRSNPGSW ENVLRDFHIP FKAISIGKLE EALEEIEFRE YKNIIIDESH RFRNESTVTY
EKLAEICRGK RVILVSATPY NNSPKDILAQ IKLFQNPRRS TIPGILDLES FFKKLEDRLK
KAKKSQDPEK FVEESKEVAR EIRDKVLKYI MIRRTRKDIE TYFKEDLERN NLKFPQVNDP
IPVLYQLNEK EDSAFMKTVE LIAKHLNYAR YTPLLYLKSQ INILEKQSQK NMASFMKVLL
VKRLESSFYA FNKTLDRFIK SYEGMLNAIN QKGKVYISKK FSDKILEFLE SDNDEEIEKL
LNEGKAEEYD IHDFTESFIE NLKKDLDILK QIKSLWQDTE RDPKLDVLIQ ELKNNPILKD
KKIIIFTESK ETAEYLTENL NKIFDNKVLL FHGGSSEEIR DKIIENFDDR SRIKKDDYRI
LVTTDVLSEG VNLHRSNIII NYDIPWNPTK IIQRVGRVNR LDTKFDEIYV YNFFPTAQVE
DQIKLKQIAR SKVEAFLNLL GGDAAILTEG ESVKSYELFD KLTSKNFLTD EDFEESELKY
YRIIEKIRDE NLDLFDKIKQ LPKKARAGKK AENITNALLT FFRKGKLMKF YLSDKNITQE
LDFLTAVKFF ECDESQQKIN IPIEEFYNLL EKNKKEFINA TYEEEFIHHK PGKDSSKELL
KHIKAIFKDR KKLTEEQEKY IDLISERIKE GALPKKTVQK ALKAIKYIED PLTAISVLKD
EIPKNLVYKQ HLGVMLNQGH KREVILSLYL GA
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