Gene SYO3AOP1_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0487 
SymbolgatA 
ID6332405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp497075 
End bp498532 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content36% 
IMG OID642656776 
Productaspartyl/glutamyl-tRNA amidotransferase subunit A 
Protein accessionYP_001930682 
Protein GI188996431 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTAT GGAAAAAATC TTTAAAAGAA CTTTCAGACC TTGTTAAATC AAAAGAAGTT 
AAACCTTCTG AAATCGTTGA AGCTTTCATA GAAAGAAAAA ACCAAGTAGA ACCAAAAATT
AAAGCTTACG TGACAGCTTT AGACGATTTA GCATTAGAAA AAGCAAAGAA AAGAGACCAA
GAATTAACAA AGCTTGAAAA CATTCCAGAC CTTTTTGGAC TGCCGATAGC AATAAAAGAT
AATATTTCTA CAAAAGATAT AAAAACAACT TGTTCATCAA AAATGCTTGA AAACTTTGTT
CCTGTTTATG ATGCAACCGT TATTGAAAGA TTGAAATCTC AAGGTTATGT AATCACAGGA
AAAACTAACT TAGACGAATT TGCAATGGGT TCTTCAACTG AAAACTCAGC ATTTTTCCCA
ACAAGAAACC CATGGGATTT AGAAAGAGTC CCGGGTGGCT CATCCGGTGG GTCTGCTGCT
GTTGTTGCTT CAGGAATGGC TCCTGCATCT CTTGGGTCTG ATACAGGAGG CTCAATCAGA
CAGCCTGCGG CATTTTGCGG AGTTGTGGGA CTTAAACCTA CATATGGAAG AGTATCAAGA
TACGGACTTG TTGCCTTTGC ATCATCCTTA GACCAGATTG GACCATTTGG AAGAACGGTT
GAAGATGTAG CAATGATAAT GAACGTTATC TCCGGAAAAG ACCCAAAAGA TTCTACATCA
AGAAGCATCC CGGTTCCAAA CTACTTAGAA AGCTTAAACA AAGATGTGAA AGGTTTAAAA
ATAGGACTTC CAAAAGAGTT TTATACAGAA GATTTAAATC CACAAATAAA AGAGATAATC
TTAAACGCCG TCAAACAGCT TGAAAAAGAA GGAATGACAG CCCACGAGAT TTCTTTACCA
TATACAAAGT ATGCAATAGA AACTTACTAC ATCATAGCTC CGTCAGAAGC ATCGTCCAAC
TTGGCAAGGT TTGATGGTGT TAGATACGGA TACAGAGCAA AAGAATATAA AAATCTTGAA
GAGATGTATT CTAAAACAAG AGATGAAGGC TTTGGTGCAG AAGTAAAAAG AAGAATCATG
ATAGGAACTT ATGCATTATC CTCCGGATAT TACGATGCAT ATTACTTAAA AGCTCAAAAG
GTTAGAACTT TAATCTATCA AGACTATATG AATGCTTTTG AAAAAGTTGA TGTAATCATA
ACTCCAACAA CGCCGGACGT AGCGTTCAAG ATTGGAGAAA AATCAAACGA CCCAATCCAG
ATGTATTTAT CAGATATTTT TACAGTATCA GCCAACATGG CAACTGTTCC AGCATTAAGC
ATACCATGCG GATTTAAAGA TAATCTGCCG GTAGGAATGC AGATAATCGG AAAGCCGTTT
GATGAAGAGA CCATATTGCA GGTAGCTTAC AAATTTCAAT CTCTAAATGA TTATCATAAG
AGATTTCCAG AAGTTTAG
 
Protein sequence
MELWKKSLKE LSDLVKSKEV KPSEIVEAFI ERKNQVEPKI KAYVTALDDL ALEKAKKRDQ 
ELTKLENIPD LFGLPIAIKD NISTKDIKTT CSSKMLENFV PVYDATVIER LKSQGYVITG
KTNLDEFAMG SSTENSAFFP TRNPWDLERV PGGSSGGSAA VVASGMAPAS LGSDTGGSIR
QPAAFCGVVG LKPTYGRVSR YGLVAFASSL DQIGPFGRTV EDVAMIMNVI SGKDPKDSTS
RSIPVPNYLE SLNKDVKGLK IGLPKEFYTE DLNPQIKEII LNAVKQLEKE GMTAHEISLP
YTKYAIETYY IIAPSEASSN LARFDGVRYG YRAKEYKNLE EMYSKTRDEG FGAEVKRRIM
IGTYALSSGY YDAYYLKAQK VRTLIYQDYM NAFEKVDVII TPTTPDVAFK IGEKSNDPIQ
MYLSDIFTVS ANMATVPALS IPCGFKDNLP VGMQIIGKPF DEETILQVAY KFQSLNDYHK
RFPEV