| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0453 |
|---|
| Symbol | |
|---|
| ID | 6330967 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 467093 |
|---|
| End bp | 468109 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642656742 |
|---|
| Product | putative transcriptional regulator, AsnC family |
|---|
| Protein accession | YP_001930648 |
|---|
| Protein GI | 188996397 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1522] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0000254867 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAA ATTTATTTTT AAAAATGATA CAAGAATCAT TTCCATTGGT TCAAAGACCC
TTTAAAAAGT TAGGAGAAGA GCTTGGAATA TCCGAAGAAG AAGCTTTATC CCTGTATGCA
AAATTAAAAG ATGAAAAGAT TATTCGTAAC ACTTCAGCTA TTTTGGAAAC AAAAAAAGTA
GGTTATAAAT CTACTTTGGT TGCGTTTAGC GTTGATAGTA TCGAAAAAGC AGCAGAATAT
ATAAATACCC ATCCTGGTGT AAGCCACAAT TATGAAAGAG ACCACGAAAT TTTTAATTTA
TGGTTTACAC TCGCTGTTCC ATCAGAATCA TCTTTGGGTT TGGAAAAAAC TATCGAGATA
TTAGCCAATA GAACTGGTGC AAAAGATTAC ATTATCCTTC CAACAATCAA GATGTTTAAA
ATTGGTGTCG TTCTTGACAC TACATCAACA GAACCTTTAA AAAAGGATAT TTCAGAAAAA
CATGAAAATA AAAATTTAGA ATTAACAGAA TTTCATAAAA AAATCCTTTA TTACATTCAA
AGAGACATTC CAATAAAATA TGAACCTTTT GAAGGTATTA TAAAAGAATT AAATTGTGAT
TATGATTCAT TTTTTAACGA AGTGAACAAT TTAATACAAG CAGGATATAT AAGAAGATTT
GCAACATTGC TTAACCATAG AAAAGCTGGA TTTACTGCTA ACGCAATGGT GGTATGGAAT
GTTCCAGAAG AATTTCAAGA GTTAGCTGGA GAAACGATAG CAAAATATAC TTCTGTTTCT
CACTGTTATA TAAGACCAAA ATTCCCACCA AAATGGAATT ATAATCTTTT TTCTATGATT
CATGGAAAAT CAAAAGAGGA TTTAGAAAGT ATTATTGATA ATATCGGTAA AGAAATACAA
ATAAAAGATT ATTTACCTCT TTATTCCTTA AGAGAATTTA AAAAACAAAG AATTGATTAT
TTTAGTCCTA AATTCTACGA ATGGGAAAAA TTAAACAGTT TGCATTCTTT GATCTAA
|
|---|
| Protein sequence | MVENLFLKMI QESFPLVQRP FKKLGEELGI SEEEALSLYA KLKDEKIIRN TSAILETKKV
GYKSTLVAFS VDSIEKAAEY INTHPGVSHN YERDHEIFNL WFTLAVPSES SLGLEKTIEI
LANRTGAKDY IILPTIKMFK IGVVLDTTST EPLKKDISEK HENKNLELTE FHKKILYYIQ
RDIPIKYEPF EGIIKELNCD YDSFFNEVNN LIQAGYIRRF ATLLNHRKAG FTANAMVVWN
VPEEFQELAG ETIAKYTSVS HCYIRPKFPP KWNYNLFSMI HGKSKEDLES IIDNIGKEIQ
IKDYLPLYSL REFKKQRIDY FSPKFYEWEK LNSLHSLI
|
|---|
| |