| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0438 |
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| Symbol | |
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| ID | 6331002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 452322 |
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| End bp | 455126 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642656729 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001930635 |
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| Protein GI | 188996384 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000251806 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGAAA AAGAAAATGT TGCTCTTGAA ATTTCCAGGA GGGATTTTTT GAAAACTGTT
GCGGCTGTAT CTGCAGCAAC TGCGATAGGG ATGGAAATAC CTGAAGAAGT TTTAGCTGCA
ACCGAATCGC AAGCAGGATG GAGATGGGAT AAGGCTGTAT GTAGATTCTG TGGAACTGGA
TGTGGAATCA TGATAGCTAC CAAAGATGAT AGAATTGTAG CAGTTAAAGG AGATCCAAAG
GCACCAGTTA ACAGAGGGTT GAACTGTATA AAAGGTTACT TTACAGCAAA AATTATGTAC
GGTGAAGATA GATTAACAAC CCCCCTTCTA AGGATGAATG AAAAAGGAGA GTTTGACAAA
AAAGGAAAAT TTAAGCCTGT TAGCTGGCAG AGAGCCTACG AAGAAATGAC AAAACAATTC
AAGAAGTACT ATAGTCAGCT TGGACCAACA GGTATTGGAT TTTTCTCTTC TGGTCAACAT
ACTATTATGG AAGGTTATGC AGCTCTTAAA TTAATGAAAG CAGGATTTAG AAGTAATAAC
ATTGACCCTA ACGCTCGTCA CTGCATGGCA AGTGCCGTAG CTGGTTTTAT GCAAACTTTC
GGAATAGATG AACCGCCTGG TTGCTATGAT GATATAGAAT TAACAGACAC AATCGTTGCA
TTTGGTTCAA ATATGGCAGA AATGCATCCT ATACTATGGT CAAGGGTTTC TGATAGAAAG
TTATCAAACC CAGATAGAGT TAAAGTAGTT GTTTTATCGA CCTTTAGACA TAGAACAATG
GATATTGCCG ACATTGATAT TGTTTTTAGA CCAAATACAG ACCTTGCAAT TTTCAACTAT
ATAGCAAGGG AAATAGTATA CAACCATCCT GAAGCAATAG ATAAAAATTT TGTAGATAAA
TACTGTGTTT TTACAACCGG ATATGCTGAT ATAGGCTATG GTATGAGAGA AGATGTTGAC
AATCCTAAAT ATTCAAGCTT AGAAAAAGAG ACAATGATTA AACAGAAGAA AAAAGTAATC
TCAGAAACAG AAGCACCTGC TTTAGCATAT CTTGGAGTAA AACCAAAAGA CGTTCTTGAA
ATGAAACATT CTGGACAAGC TGATGCTCAT TGGGTAATTA CGTTCGAAGA ATTCAAAAAA
GCACTTGAGC CTTACACCTT AGATTATGTT GCAAGAATAG CCAAGGGCGA TCCAGATGAA
CCACTTGAAC AATTCAAAGA AAAATTAAAA ACTATGGCAG AGCTTTATAT AGAGAAAGGA
AGAAAGGTTG TAACATTTTG GACAATGGGA TTTAATCAAC ATACGCGTGG TACTTGGGTT
AACGAACAAG CTTACATGGT TCATTTATTA CTTGGTAAAA TGGCAAAGCC GGGTGAAGGT
GCATTTAGCT TAACAGGACA GCCTTCTGCC TGTGGAACAG CAAGAGAAGT TGGTACATTT
TCACATAGAT TACCTGCAGA TATGGTTGTA AACAATCCGG AACACAGAAA AATTGCTGAA
AAAATATGGA AAGTTCCTGA AGGTACAATA AATCCAGTAC CAGGGTCTCA TATCGTCCAA
ATAATGAGAG ATCTTGAGGA TGGAAAAATA AGATGGGCAT GGGTTCAAGT TTGTAATCCA
TGGCAAGATA CAGCAAACGC AAATCATTGG ATTAAAGCTG CAAGAGAAAT GGATAACTTT
ATTGTAGTTT CTGAAGCATA CCCAGGAATA TCTGCAAAAG TTGCAGATCT AATTTTACCA
TCAGCAATGA TTTATGAAAA ATGGGGTGGC TATGGTAATG CTGAAAGAAG AACTCAGCTC
TGGAGACAGC AAGTTACTCC GGTTGGAGAA GCAATGTCTG ATTCATGGCA AGTCATTGAA
TTTTCAAAAT TCTTTAAATT AAAAGAAGTA TGGAAAGAAT GGAAGCTACC AAATGGAACT
GTTTTACCCG ATGTTTTAAA CCAGGCTAAA GCGATGGGCT ATGATCCAGA AATGACATTA
TACGATGTAT TATTTGCAAA TGCTGAAGCA AAAAGCTATA AATGGCCAGA TCCAATTGGA
AAAGGATTTT TAAACACAGA GGCTGAAGGA GACAAGAGAA ATGTTATCGG TGTTGATGGC
AAGCCTTGGA AAGGTTATGG ATTCTTTATT CAAAAATATC TATTTGAAGA GTACAGAAAG
TTTGGACTTG GACATGGTCA CGACCTTGCA GACTTTGATA CATATCATAG AGTTAGAGGA
TTAAAATGGC CTGTTGTTGA TGGAAAAGAA ACTTTATGGA GATTTAACGC TAAGTATGAT
CCATATGCAA GAAAAGCTGG GGCTGGTGAG TTTGCATTCT ATGGACCTGC TTTCAAAAAG
ATTCCAAAAG GAAATCTTCA TGGACCTTCA CAAGAAATGG TTGACCTTAA AAATAAAGCG
AAAATATTCT TTAGACCTTA TATGGACCCA CCTGAAGTCC CTGATGAAAA ATATCCAATC
TGGTTATGTA CAGGAAGAGT TTTAGAGCAT TGGCATAGTG GTACAATGAC AATGAGGGTT
CCGGAACTTT ACAGGGCTGT TCCAGAGGCT CTATGTTATA TGCATCCAAA AGATGCGGAA
AAAATAGGTG TTAAGGATGG AGAGCTTGTT TGGGTGGAAA GCAGAAGAGG TAAGGTAAAA
GCTCGTGTTG CAACAAGAGG AAGAAATAGA CCACCAAGAG GCTTGGTATT TGTTCCTTGG
TTTGATGAGA GAGTTTACAT AAATAAAGTT ACTCTTGACC AAACCTGTCC TATATCAAAA
CAAAATGATT TCAAAAAATG TGCAGTAAAA ATTTATAAAG CTTAA
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| Protein sequence | MEEKENVALE ISRRDFLKTV AAVSAATAIG MEIPEEVLAA TESQAGWRWD KAVCRFCGTG
CGIMIATKDD RIVAVKGDPK APVNRGLNCI KGYFTAKIMY GEDRLTTPLL RMNEKGEFDK
KGKFKPVSWQ RAYEEMTKQF KKYYSQLGPT GIGFFSSGQH TIMEGYAALK LMKAGFRSNN
IDPNARHCMA SAVAGFMQTF GIDEPPGCYD DIELTDTIVA FGSNMAEMHP ILWSRVSDRK
LSNPDRVKVV VLSTFRHRTM DIADIDIVFR PNTDLAIFNY IAREIVYNHP EAIDKNFVDK
YCVFTTGYAD IGYGMREDVD NPKYSSLEKE TMIKQKKKVI SETEAPALAY LGVKPKDVLE
MKHSGQADAH WVITFEEFKK ALEPYTLDYV ARIAKGDPDE PLEQFKEKLK TMAELYIEKG
RKVVTFWTMG FNQHTRGTWV NEQAYMVHLL LGKMAKPGEG AFSLTGQPSA CGTAREVGTF
SHRLPADMVV NNPEHRKIAE KIWKVPEGTI NPVPGSHIVQ IMRDLEDGKI RWAWVQVCNP
WQDTANANHW IKAAREMDNF IVVSEAYPGI SAKVADLILP SAMIYEKWGG YGNAERRTQL
WRQQVTPVGE AMSDSWQVIE FSKFFKLKEV WKEWKLPNGT VLPDVLNQAK AMGYDPEMTL
YDVLFANAEA KSYKWPDPIG KGFLNTEAEG DKRNVIGVDG KPWKGYGFFI QKYLFEEYRK
FGLGHGHDLA DFDTYHRVRG LKWPVVDGKE TLWRFNAKYD PYARKAGAGE FAFYGPAFKK
IPKGNLHGPS QEMVDLKNKA KIFFRPYMDP PEVPDEKYPI WLCTGRVLEH WHSGTMTMRV
PELYRAVPEA LCYMHPKDAE KIGVKDGELV WVESRRGKVK ARVATRGRNR PPRGLVFVPW
FDERVYINKV TLDQTCPISK QNDFKKCAVK IYKA
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