| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0412 |
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| Symbol | ispG |
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| ID | 6332219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 428511 |
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| End bp | 429572 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 642656703 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001930609 |
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| Protein GI | 188996358 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.00838324 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAAACA GAAGAAAGAC AAGACCAGTT TATGTAGGTA ATGTTAAAAT AGGCGATGGA
GCACCGATAG TTGTCCAATC TATGACAGAC ACAAAAACGC ATGACATAGA AGCAACTTTA
AATCAGATAA ATAGGCTTGC AAAAGCAGGT TGTGAAATTA TAAGGGTAGC CGTTCCAAGA
GAAGAGGATG CGTTAGCACT GCAAGAAATT GTAAAAAATT CTCCAATTCC GGTAATAGGT
GATATACATT TTTCTCCAAG AATTGCCTTT TTATCTCTTG AAAGCGGTAT ACACGGAATC
CGACTTAATC CGGGAAACAT TAACGATAAA GGAAAAATTA AAGAAATCCT TCAAGAGTGT
AAGAAAAAAA ATATTGCAGT TAGACTTGGT GTTAACTCTG GTTCCTTGGA AGAAAGACTT
CTTGAAAAGT ATGGTTATCC GTCTGCTGAA GCCTTGGCAG AAAGTGCTTT GTACTGGTCA
GAATTTTTTG AGTCTGTAGG TTTTACAAAC TTTAAAGTTT CTATAAAAGG TTCTGACGTA
CTTCAAAATA TAAAAGCAAA TAAAATCTTT GCAGAAAAAA CTGACATACC GCTTCATATA
GGTATCACAG AAGCAGGGCC AGCAGGTAGA GGGTCTATAA AGTCAGCTGT CGGTATTGGC
ATTTTACTGT ATGAGGGCAT CGGAGATACA GTAAGGGTCT CTTTAACAGC AGACCCGGAG
GAAGAGATAA AGGTAGTATA TCAAATTCTT CAAGCACTGG ATTTGAGAAG AAAAGGTGTT
GAGATTGTAT CCTGTCCAAC ATGTGGAAGG ATTGAGGTAA ACTTGCCGGA AGTTGTCAAA
AAAGTTGAAG AAAAATTAGA AGCGGTAGAT AAACCTTTAA AGGTTGCAAT AATGGGATGC
GTTGTCAATG CAATTGGAGA AGCGAAAGAA GCAGATATTG GGTTAGCATG TGGAAATAAA
TCAGCTATTT TATTTAAAAA AGGAGTTCCA ATCAAAAGAG TCTCTGAAGA AGAGATGGTA
GAGGAGTTAT TAAACGAAAT TCAAAGAATG GATAATGAAT AA
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| Protein sequence | MINRRKTRPV YVGNVKIGDG APIVVQSMTD TKTHDIEATL NQINRLAKAG CEIIRVAVPR
EEDALALQEI VKNSPIPVIG DIHFSPRIAF LSLESGIHGI RLNPGNINDK GKIKEILQEC
KKKNIAVRLG VNSGSLEERL LEKYGYPSAE ALAESALYWS EFFESVGFTN FKVSIKGSDV
LQNIKANKIF AEKTDIPLHI GITEAGPAGR GSIKSAVGIG ILLYEGIGDT VRVSLTADPE
EEIKVVYQIL QALDLRRKGV EIVSCPTCGR IEVNLPEVVK KVEEKLEAVD KPLKVAIMGC
VVNAIGEAKE ADIGLACGNK SAILFKKGVP IKRVSEEEMV EELLNEIQRM DNE
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