| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0370 |
|---|
| Symbol | |
|---|
| ID | 6332120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 386261 |
|---|
| End bp | 386812 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642656660 |
|---|
| Product | Thiamine-phosphate diphosphorylase |
|---|
| Protein accession | YP_001930568 |
|---|
| Protein GI | 188996317 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0352] Thiamine monophosphate synthase |
|---|
| TIGRFAM ID | [TIGR00693] thiamine-phosphate pyrophosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00000380325 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCATA GATTTTATTT TATTACTGAC AGAAAAAAGT TTAAAAAACC TTTTCTTGAT
ACTATAAAAG AAGTTTTAGA TAAAGGCATT AGATTATTTC AAATCAGAGA AAAAGACCTT
CCAGATAATG AACTTTTTAA GCTTACGGAA GATGTTTTAA AGATTGCCGA AGGTTACGAT
GTAAAGATAA TCATCAATAG CAGGCTTGAT GTTGCTTTAC TTTTAAATCT TGATGGCGTG
CATCTTCCAG AAAATGGTCT TCCAATAGAG CCAATAAAGA AAAAATTTCC TAATTTGATA
GTTGGCAAGT CTTGTCATTC TTTGGAATGT GGATTACAGG CTTATCAAGA TGGGGTAGAT
TATGTTTTTA TTTCTCCAAT TTTTCAGGTA GAAGGCAAAG CACCACCGAT CGGGGTAGAA
AAGTTAAGAG AGATAGTAAA TAAATTACCT TTGCCTGTTT ATGCTCTTGG TGGTATAAAT
AAGTACAATG TTCAATCTGT GCTTGATACA GGCGTTTATG GAATTGCAAG CATAAGATAT
TTTTTAGATT AG
|
|---|
| Protein sequence | MLHRFYFITD RKKFKKPFLD TIKEVLDKGI RLFQIREKDL PDNELFKLTE DVLKIAEGYD
VKIIINSRLD VALLLNLDGV HLPENGLPIE PIKKKFPNLI VGKSCHSLEC GLQAYQDGVD
YVFISPIFQV EGKAPPIGVE KLREIVNKLP LPVYALGGIN KYNVQSVLDT GVYGIASIRY
FLD
|
|---|
| |