| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0358 |
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| Symbol | |
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| ID | 6331713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 373491 |
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| End bp | 375542 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642656649 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001930557 |
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| Protein GI | 188996306 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000000301729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGAAA AGAAAATAGT TATTGTAGAA TCACCAAAAA AAGCAAAAGA GATATCACAC
TTTTTAGGAA AAGATTTTAT TGTGAAAGCA ACAGTAGGGC ACTTTAAAGA CCTTCCAGAA
AATGAAATGG GAGTTGACTT AAACACATAT GAGCCAAAAT TTGTAATAAA ATCTCAAAAT
CATAAAAAAA TCTTATCAGA AATAAAAAAA TTGGCAGAAA AATCTGAAGT AATCATAGCA
ACTGACCCAG ATAGAGAAGG ATATGCTATA GGATTTTTTA TGTATGAAGA ATTAAAGAAA
AAAGCAAAGG AAGTAAAAAG AGCTGAATTT CATGAAATTA CTAAGGAGCA TATTAAAGAA
AAAATAAAAA ACGCAGTTCC ATTTGAAAAA ACAAATTTTG GATTATTTAA TGCGTTTCTT
GGAAGAAGGG TTGGAGACAG GATTGTTGGT TATACATTAT CACCGATAGC ATCAAGAGAG
ATAGGTGGAA GATTCAGCGT CGGTAGAGTT CAGTCTCCAG CTGTAAGATT GATAGTAGAA
AGAGAAATAG AAATTCAAAA TTTCAAGCCA ACGCCGTACT ATGTGTTATC TGCTGTTTTA
CGTGCAACGT CTCACGTCTC ACCTCTCACG TTTACAGCTA TTTATGAAAA TCCAAAAATA
GAAAACAAAG AAGAAGCAGA AAAAATCTAT GCAGATATAA AAGATGAGAA AATAGCTACT
ATAAAGAAAG TAGAAAAAAA GCAAGTAAAA CAATCCCCAA AACCACCATT TACAACTTCT
ACACTCCAGC AAACCGCTAG CACAGTTTAT AGATTTGCTC CAGAAAAAAC GATGATGTTA
GCCCAAGACC TTTTTGAAAG CGGACTTATT ACATACCACA GAACAGACAG CGTGAGAATA
AGTGAAAAAG CTATAGATGG AATTAGAAAT CTAATAAACA AAGAGTTTGG TAAAGATTAT
CTGCCGGAAA AAATAAGAGT TTACAAATCA AAAAATACAC AAGCAGATGC CCATGAAGCC
ATAAGAATCA CCCATTTTGT AAACTTAGAA GAACAAAAAA AGCTTATTAA AGAAAAAGGT
TTATCAGAAG ACCATTTTAA ACTGTTAAAG CTTATCTATG AGAGAACAGT AGCATCTCAG
ATGGCTGATG CAATTTTTGA AAGAACAAGT GCGGCTGTTG ATATAAAAGG CTATACATTT
AAAGCCAGTG GCTCAATCTT AAAATTTAAA GGTTATAAGG CTGTTTATGA TTTAGAAGAA
GAGGAAGATA AAGAAGAAAA TCAAAAACTA CCAGATTTAA AAAATAAAGA TGTCTTAACG
CTTGAAAAAA TAAATTTGGA AGAAAAATTT ACAAAACCAC CGGCAAGATA CACAGAAGGC
GGACTTGTCA AAAAATTGGA AGAGCTTGGT ATAGGTAGAC CTTCAACCTA TGCAACGATA
ATAAAAACTA TAAAAGAAAG AGGTTATGTA GTTAAGGAAA ATGGAAGTTT AAGACCAACA
GAAAACGCCT TTCATCTGAT TGAATATTTA AACACTCGCT ACAATTGGGT GATAGATTAC
TCTTTTACAA AGAAAATGGA AGATTTTCTT GATAAAGTAG AAGAGAATAA AAAAGATTGG
AAAGAGTTTG TAAAACAGCT TCATGAAAAA TCAGGTTCAA AACAAAATGT GAAAATATCA
AAGAAAATGC TTGATTATGC AAAAGATTTA GCAGAAAAAC ATGGCAAAAG CATAGAAGAG
ATAAAAGATG ACCCAGAAAA ACTAAAAGAG TTTATCGATG CTCACGCTGA AAAAAATCCA
TCTCAAAAAC AAATAGAATA CGCAAAAAGT TTGGCTGAAA AAACGGGCTT GAAACTAACA
GAGAAAGAGC TTTTAGATAG AAAATTGCTT ACAAAATGGA TAAATAAAGC AAAGAAAGAA
ATGATGAAAA ACTACCAGTT GTCAGAAAAA CAAAAAAATG TTTTAATAAA GTATGGTAGA
GAAGATTTGG TTAACAATCC GGTCCAAGCT TTAAAGTTTA TAAAAAGTAA GCTTTCAAGA
TATAAAAAAT AA
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| Protein sequence | MSEKKIVIVE SPKKAKEISH FLGKDFIVKA TVGHFKDLPE NEMGVDLNTY EPKFVIKSQN
HKKILSEIKK LAEKSEVIIA TDPDREGYAI GFFMYEELKK KAKEVKRAEF HEITKEHIKE
KIKNAVPFEK TNFGLFNAFL GRRVGDRIVG YTLSPIASRE IGGRFSVGRV QSPAVRLIVE
REIEIQNFKP TPYYVLSAVL RATSHVSPLT FTAIYENPKI ENKEEAEKIY ADIKDEKIAT
IKKVEKKQVK QSPKPPFTTS TLQQTASTVY RFAPEKTMML AQDLFESGLI TYHRTDSVRI
SEKAIDGIRN LINKEFGKDY LPEKIRVYKS KNTQADAHEA IRITHFVNLE EQKKLIKEKG
LSEDHFKLLK LIYERTVASQ MADAIFERTS AAVDIKGYTF KASGSILKFK GYKAVYDLEE
EEDKEENQKL PDLKNKDVLT LEKINLEEKF TKPPARYTEG GLVKKLEELG IGRPSTYATI
IKTIKERGYV VKENGSLRPT ENAFHLIEYL NTRYNWVIDY SFTKKMEDFL DKVEENKKDW
KEFVKQLHEK SGSKQNVKIS KKMLDYAKDL AEKHGKSIEE IKDDPEKLKE FIDAHAEKNP
SQKQIEYAKS LAEKTGLKLT EKELLDRKLL TKWINKAKKE MMKNYQLSEK QKNVLIKYGR
EDLVNNPVQA LKFIKSKLSR YKK
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