| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0342 |
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| Symbol | |
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| ID | 6332715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 349784 |
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| End bp | 351445 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642656628 |
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| Product | transposase |
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| Protein accession | YP_001930541 |
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| Protein GI | 188996290 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000508394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAACTC TGCAGTGCCA ACTTGAATTT CAAAATAAGC AAGAGAAAGA GATTGTATTA
GATTTGATGC GTAGATTTTC ATCAGCAATG AGATATGCTT ATCAAAGGTT ATTGGAAGGT
GAAAAAAGAA AGGATTTGAA AAAGAATTTA TCAGAACTAT TTGACATAAA CACAAGATAT
TCAGATGATG CTATACTCTT GGCACACTCA ACAATCGCAT CATGCGAAGA AAGAGGTCAA
AACCCAAAGA AGCTCATATT TGGCTCAAGG AAATTATTTG AGCAACTAAA GAAAAATCAT
TTAACAGGAA AAAGAAGAAA AGAGTTAAAG ACAAGATGGA AAGAAAGCAG ACAGGGAAAT
TTGTATTCAA GAGGAGATAA ATCTAAACAA GGAAATCTGA ATTTAAGATT TGAGTGGATT
GATAATCAGC TTTACTTGAG AATAAACACA GGAAATAGAC AGTATATCTA TGCAAAAGTA
ATTAGAAGTG TTAAGAGAAA AAATGATAAA TGGATAGAGT TTATGTTTAT GCTGGAAAAT
GCGTATAGAT ACGAAGCGTG GTTTCCATAC TCAGTCAGAC TAAAAGTAAA AAACGGTAAT
GTATATGCTT TTATATCTAT AGAAGAGAAA CTACCACCTA TTACAATCAA AAAAGACAAT
GGAATAATAG GTATAGATGT AAACGCATAT CCATTTCATC TTGCATTGGC TTTTATAAGT
AAAGACGGAA ATTTAGAGAA ATATGAAAGA ATTAATCTAA ACGAACTGTT AGAAGTAAAT
TCAGAAAAAA GACAATACTT AGAATGGCAA ATAGCACATA AGATAATAGA GATTGCCAAG
AGAGAAAACA AAGCAATATC TATAGAAAAT CTGCAAAAAC TACCAAAAGG CAAAAGAGGA
GACGGATTTG CAAAACTAAG AAGAAGACTA CAAAAATGGA GCTATAAAAG ATTATTAGAA
AAAATAGAAG TATTAGCAAG AAGAAGTGGC ATAGAAATAA TAAAAGTCAA TCCAGCATAT
ACATCAGTAA TTGGAAAGCT AAAATACTCG CCACAATACA ACATAGATAA AGATATAGCA
GGAGCTTACG TAATAGCAAG GAGAGGGTTG GGATTTAAAG AGAAATTACC AAAGAATTAC
AAAGAACTTT TAAATGATAC TGATTTTCTA TCATACACTA TAGCAAAAAT TGAAGATAAC
ATTAAAAAAC TAAAACAAAA ACTAAAAGAA GAGAAAAACG AATACAAGAG AAATAAACTA
AAAAGCACAT TAGCAAAATT AAGAAAAAAC CTAAAAATAC TACAACAACA CGTCTCACTT
CTCACATCTC ACGTCTCACG TTTAGAAAGT GGAAAGAGTG AGACAGCTAC CCAACAAACT
GTCAACCAAC GGAAGGAACA GGTGAGGGGC TTACTTACAG GTAAGCATAA AAGCTGGCAA
GTTCTTTCCA TAGCCTTGGC CTTCTGCTGT CTTGAAAGAT CGTATAGAGA TCTTTCTCCC
TTAAAACAAA TAATTGTTTT AGGAGATTGG ATAGCAGTGG CTAACAGGTT AGTTCCTGTA
CTTGGTGCAG GGACTATGAC ACTTCCAAAA TACCGCCTGT TGGGGTCGGA AGTGTCTGAA
ATGGCGGAAT ACAAATACCC CAACCCAAAC TGTACAAACT GA
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| Protein sequence | MITLQCQLEF QNKQEKEIVL DLMRRFSSAM RYAYQRLLEG EKRKDLKKNL SELFDINTRY
SDDAILLAHS TIASCEERGQ NPKKLIFGSR KLFEQLKKNH LTGKRRKELK TRWKESRQGN
LYSRGDKSKQ GNLNLRFEWI DNQLYLRINT GNRQYIYAKV IRSVKRKNDK WIEFMFMLEN
AYRYEAWFPY SVRLKVKNGN VYAFISIEEK LPPITIKKDN GIIGIDVNAY PFHLALAFIS
KDGNLEKYER INLNELLEVN SEKRQYLEWQ IAHKIIEIAK RENKAISIEN LQKLPKGKRG
DGFAKLRRRL QKWSYKRLLE KIEVLARRSG IEIIKVNPAY TSVIGKLKYS PQYNIDKDIA
GAYVIARRGL GFKEKLPKNY KELLNDTDFL SYTIAKIEDN IKKLKQKLKE EKNEYKRNKL
KSTLAKLRKN LKILQQHVSL LTSHVSRLES GKSETATQQT VNQRKEQVRG LLTGKHKSWQ
VLSIALAFCC LERSYRDLSP LKQIIVLGDW IAVANRLVPV LGAGTMTLPK YRLLGSEVSE
MAEYKYPNPN CTN
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