Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0337 |
Symbol | |
ID | 6332240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 344956 |
End bp | 345807 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642656623 |
Product | UspA domain protein |
Protein accession | YP_001930536 |
Protein GI | 188996285 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000175107 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGTA AGATACTAAC AGCAATTGAC TTAACAGAAG ATAGTAAGAC TGTTTTAGAA GCCGGCTCTA AAATTGCCAA AGCTAAAAAT GCAACAGTTT ATATTGTTTA TGTTTTAGAG CCGCCAAATG TTCCATTTTT TGATGAGCTT CCGACAGAAG AAAAAGAAGC TCTTTTAAAT TTGCAAAAAG TTTTAAAAGA AAAAGCTAAA GAAACTTTAT CTGAATATAA ACAAAAACTT GAATCGGAAG GTTTATGTAT AGTTCCAATT ATCTTACAAG GTCAAGTTGT TGAGTCTGTT TTAGAATTTT CCGAAAACAA TGATATTGAT TTAATTATTG TAAAATCTCA TAAAAAATCA GAGATTGAAG AAAAAGCCAT AGGTAGCAAC TCTTTAAGAA TAGCATCAAA GTCCAAAATT CCGGTACTTG TTATAAAAGA CGACAAAACT CAGTATAATC ATATACTTGT TGCCTATGAC TTTTTGCCTA CTTCTGAAGA AGCATTGAAA TTTTCATTGG ATTTAGCATC TATTTATAAT TCAAAGCTTA CAGTAATTCA TGTTGATAAT GATTCACATT TTACTCACAT AAAATCAGTT TATGAAAAAG TAAGGCAGCA TAAGATTGAA AAATTACAAA AGCTAAAAGA AGAGTATCCA TCGATCGAGG TTGTATACAA AGAAGGTCTC CCGGAAAGGG AAATTTTAAA GTTTTCAGAA AAAGAAAACG TTGACCTTAT AGTTACAGGT AAAAGGAAAG ATAAAGGCGG AAAGTTGTCG TTTATAGGTT CTACATCTTA TAAAATACTT AAAGGAGCAA AGACTGCTGT TTTAGTATTT AGGAGTAAAT AA
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Protein sequence | MLRKILTAID LTEDSKTVLE AGSKIAKAKN ATVYIVYVLE PPNVPFFDEL PTEEKEALLN LQKVLKEKAK ETLSEYKQKL ESEGLCIVPI ILQGQVVESV LEFSENNDID LIIVKSHKKS EIEEKAIGSN SLRIASKSKI PVLVIKDDKT QYNHILVAYD FLPTSEEALK FSLDLASIYN SKLTVIHVDN DSHFTHIKSV YEKVRQHKIE KLQKLKEEYP SIEVVYKEGL PEREILKFSE KENVDLIVTG KRKDKGGKLS FIGSTSYKIL KGAKTAVLVF RSK
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