Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0333 |
Symbol | |
ID | 6332236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 340540 |
End bp | 341508 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656619 |
Product | Transketolase central region |
Protein accession | YP_001930532 |
Protein GI | 188996281 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3958] Transketolase, C-terminal subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AAATTGATAT AAATAAATTA CCTAAAAAAG CATTAAGAGA TACATACGGA GAAGTCTTAG TTGAGCTTGG AAAGATAGAC CCAGAAATGG TTGTTTTAGA TGCAGATTTA TCAGAATCTA CAAGAACTCA TAAATTTCAT GTTGCTTATC CGGATAGATT TTTCAATGCC GGAATTGCAG AACAAAACTT GATTGGTATA GCTGCAGGAC TTGCTTATAC TGGCAGGACT GTTTATGCAT CTTCATTTGC CATATTTTTA GCCGGAAGAC CCTGGGAGAT AATCAGACAG CAAATAGCTT ACAATAAACT AAACGTTAAG CTTGTAGCTT CTCATGGTGG TGTTTCTGTA GGTCAAGATG GAGCTTCTCA TCAAATGAAT GAAGATATAT CACTGATGAG AACACTGCCA AATATGAATG TAATCGTTCC TGCAGATAGC GTTGAGATGG AAAAAGTTCT TAAAAAAGTT CATTGGATTA AAGAGCCGTT TTATATAAGA ATGGGAAGGG AAAAATTCCC GGTAATATTG CCTGAAAACT ACGAGTTTGA ACTTGGTAAA GGTTATGTAT TAAAAGAAGG TAAAGATGTA TCTGTTATAG CCTGTGGTGT GATGGTTTCT ATGGCTTTAC AAGCTGCTTA CGAGCTTGAA GATGAAGGTA TAGATGTAGA AGTTATAAAC ATGTCTTCTA TAAAACCTAT TGATAAAGAT TTAATCATAC AAACCGCTAA AAAAACAGGT GCAGTGGTTA CATCAGAAGA GCATTCTATA ATCGGCGGTC TTGGAAGTGC AGTGGCAGAA GTTTTAGCAG AAAACTATCC AACTATCCTT GTAAGACATG GTGTTGAAGA TAGATTTGGC ATATCCGGTC CGGCTTGGGA AGTAATGGAA GAGCTTGGTT TATCTGTACC TTGTTTGAAG AAAAAGATAA AAGAAGCTTT AACTAAAAAA GTGAGATGA
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Protein sequence | MAEKIDINKL PKKALRDTYG EVLVELGKID PEMVVLDADL SESTRTHKFH VAYPDRFFNA GIAEQNLIGI AAGLAYTGRT VYASSFAIFL AGRPWEIIRQ QIAYNKLNVK LVASHGGVSV GQDGASHQMN EDISLMRTLP NMNVIVPADS VEMEKVLKKV HWIKEPFYIR MGREKFPVIL PENYEFELGK GYVLKEGKDV SVIACGVMVS MALQAAYELE DEGIDVEVIN MSSIKPIDKD LIIQTAKKTG AVVTSEEHSI IGGLGSAVAE VLAENYPTIL VRHGVEDRFG ISGPAWEVME ELGLSVPCLK KKIKEALTKK VR
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