Gene SYO3AOP1_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0333 
Symbol 
ID6332236 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp340540 
End bp341508 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content36% 
IMG OID642656619 
ProductTransketolase central region 
Protein accessionYP_001930532 
Protein GI188996281 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AAATTGATAT AAATAAATTA CCTAAAAAAG CATTAAGAGA TACATACGGA 
GAAGTCTTAG TTGAGCTTGG AAAGATAGAC CCAGAAATGG TTGTTTTAGA TGCAGATTTA
TCAGAATCTA CAAGAACTCA TAAATTTCAT GTTGCTTATC CGGATAGATT TTTCAATGCC
GGAATTGCAG AACAAAACTT GATTGGTATA GCTGCAGGAC TTGCTTATAC TGGCAGGACT
GTTTATGCAT CTTCATTTGC CATATTTTTA GCCGGAAGAC CCTGGGAGAT AATCAGACAG
CAAATAGCTT ACAATAAACT AAACGTTAAG CTTGTAGCTT CTCATGGTGG TGTTTCTGTA
GGTCAAGATG GAGCTTCTCA TCAAATGAAT GAAGATATAT CACTGATGAG AACACTGCCA
AATATGAATG TAATCGTTCC TGCAGATAGC GTTGAGATGG AAAAAGTTCT TAAAAAAGTT
CATTGGATTA AAGAGCCGTT TTATATAAGA ATGGGAAGGG AAAAATTCCC GGTAATATTG
CCTGAAAACT ACGAGTTTGA ACTTGGTAAA GGTTATGTAT TAAAAGAAGG TAAAGATGTA
TCTGTTATAG CCTGTGGTGT GATGGTTTCT ATGGCTTTAC AAGCTGCTTA CGAGCTTGAA
GATGAAGGTA TAGATGTAGA AGTTATAAAC ATGTCTTCTA TAAAACCTAT TGATAAAGAT
TTAATCATAC AAACCGCTAA AAAAACAGGT GCAGTGGTTA CATCAGAAGA GCATTCTATA
ATCGGCGGTC TTGGAAGTGC AGTGGCAGAA GTTTTAGCAG AAAACTATCC AACTATCCTT
GTAAGACATG GTGTTGAAGA TAGATTTGGC ATATCCGGTC CGGCTTGGGA AGTAATGGAA
GAGCTTGGTT TATCTGTACC TTGTTTGAAG AAAAAGATAA AAGAAGCTTT AACTAAAAAA
GTGAGATGA
 
Protein sequence
MAEKIDINKL PKKALRDTYG EVLVELGKID PEMVVLDADL SESTRTHKFH VAYPDRFFNA 
GIAEQNLIGI AAGLAYTGRT VYASSFAIFL AGRPWEIIRQ QIAYNKLNVK LVASHGGVSV
GQDGASHQMN EDISLMRTLP NMNVIVPADS VEMEKVLKKV HWIKEPFYIR MGREKFPVIL
PENYEFELGK GYVLKEGKDV SVIACGVMVS MALQAAYELE DEGIDVEVIN MSSIKPIDKD
LIIQTAKKTG AVVTSEEHSI IGGLGSAVAE VLAENYPTIL VRHGVEDRFG ISGPAWEVME
ELGLSVPCLK KKIKEALTKK VR