Gene SYO3AOP1_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0320 
Symbol 
ID6331521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp328138 
End bp328731 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content32% 
IMG OID642656605 
Productsmall GTP-binding protein 
Protein accessionYP_001930519 
Protein GI188996268 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones83 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGTT TAAAAAGTGT AAAGTTTGTA AAAAGTGCAG TTAAACCAGA AGACTTTCCA 
CCACCAGACA AGCCAGAGAT AGCCATAGTT GGTAGGTCTA ACGTAGGAAA GTCTTCTTTA
ATAAATGCTA TTTTTAAAAG AAGCATCGCA AAGGTAAGTG CTACACCAGG AAAAACGAAA
CTTATCAACT TTTTTCTCTT AAATGATGAT ATTTACTTTG TAGACCTACC AGGTTATGGA
TTTGCGGCTG TGTCACATAA AGAAAAGCAA AACTGGAAAA GAATGATAGA AGATTATCTT
TTAAATAGAG AAAACCTAAA TTTAATCATC ATGCTTGTAG ATACAAGATA TCCACCTACA
AATCTTGATA TTTTAATGAA AGAATGGCTT GAATCTTTTG AAAAACCTTA CATAGTTGTT
GGCACAAAAA TAGATAAGTT AAATCAAAGT GAAAAAGCAA AAGCTGAAAA AGTTATAAGA
GAGACTTTAG ATTTAAGCAA GGATGTTCCA GTTTATTTAG TTTCTGCAAA AGAGGGAACA
AATATAGATA AGCTTACAAG TGACATTTTA TCAATGGTTA GGTCTGAGGG TTGA
 
Protein sequence
MSSLKSVKFV KSAVKPEDFP PPDKPEIAIV GRSNVGKSSL INAIFKRSIA KVSATPGKTK 
LINFFLLNDD IYFVDLPGYG FAAVSHKEKQ NWKRMIEDYL LNRENLNLII MLVDTRYPPT
NLDILMKEWL ESFEKPYIVV GTKIDKLNQS EKAKAEKVIR ETLDLSKDVP VYLVSAKEGT
NIDKLTSDIL SMVRSEG