Gene SYO3AOP1_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0296 
SymbolrpsL 
ID6331020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp299822 
End bp300229 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content40% 
IMG OID642656576 
Product30S ribosomal protein S12 
Protein accessionYP_001930495 
Protein GI188996244 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAACTA TTAACCAATT GGTTAGAAAA GGTAGAGAGA AAGTAGAGAA AAAATCAAAA 
GCTCCAGCAT TGCAAGGAAA CCCTCAAAAA AGAGGCGTTT GTGTTCGTGT ATATACTACA
ACACCTAAAA AGCCAAACTC AGCTTTGAGA AAGGTTGCAA GGGTGAGATT GTCAAATGGT
TACGAAGTAA CTTGCTATAT CCCAGGAATT GGTCATAACC TGCAAGAGCA CTCTATTGTT
CTTGTTAGAG GTGGAAGGGT TAAGGACTTA CCAGGGGTAA GGTACAAAAT TATTCGTGGT
GCTCTCGATG CTGCTGGTGT TAAAGATAGA AAACAATCAA GGTCTAAGTA TGGTGCTAAG
AGACCAAAAC CAGGTCAAGC TGCTGCTACT ACTGGAAAGA AAAAGTAA
 
Protein sequence
MPTINQLVRK GREKVEKKSK APALQGNPQK RGVCVRVYTT TPKKPNSALR KVARVRLSNG 
YEVTCYIPGI GHNLQEHSIV LVRGGRVKDL PGVRYKIIRG ALDAAGVKDR KQSRSKYGAK
RPKPGQAAAT TGKKK