Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0294 |
Symbol | |
ID | 6331018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 297189 |
End bp | 299270 |
Gene Length | 2082 bp |
Protein Length | 693 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642656574 |
Product | elongation factor G |
Protein accession | YP_001930493 |
Protein GI | 188996242 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0480] Translation elongation factors (GTPases) |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00484] translation elongation factor EF-G |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCAAGGC AAGTACCAAT TGAAAAATTA AGAAATATAG GAATAGTTGC CCATATTGAC GCTGGAAAAA CAACAACAAC AGAAAGAATA TTATTTTACA CCGGAAAAAC TTACAAAATC GGTGAAGTCC ATGAAGGCGC TGCTACCATG GACTGGATGG AACAAGAAAA AGAAAGAGGT ATTACAATTA CATCAGCAAC AACAGCTGCA TACTGGAAGG GATACCAATT AAACATAATT GACACTCCAG GGCACGTTGA CTTTGGTGTT GAAGTTGTTA GGTCTATGAA AGCTCTTGAT GGTATCGTTT TCGTTTTTGC TTCGGTTGAA GGCGTTCAAC CACAGTCAGA GGCAAACTGG CGATGGGCTG ATAGATTTGG AGTTCCAAGA ATAGCATTTG TTAATAAAAT GGATAGAGTT GGTGCAAACT TTTTTGGCGT TTACGAAGAT ATGAAGAAAA AGCTTGGAAC AAACCCTGTC CCTATCCAAG TACCAATTGG TGCTGAAGAT AACTTTAAAG GTGTTGTAGA CCTTTTTAAT ATGAAAGCTA TCATTTGGGA AGGTGATGAG CTTGGTGCTA AATTTGAAGA GAAAGAAATT CCAGCAGAGC TTATAGACTT AGCACAAGAA TGGCGTGAAA AAATGATTGA AGCTATCGTA GAAACAGATG AATCTTTAAT GGAAAAGTAC TTTGCCGGAG AAGAAATACC GGCTGAAGAC TTAAAGAAAG CATTAAGAAA AGCAACAATA GAAAGAAAGC TTGTTCCAAT GCTTTGTGGA ACGGCGTTTA AAAATAAAGG TATTCAACCA ATGTTAGATG CAGTAATAGA TTTCTTACCT TCTCCTGTAG ATGTTCCTCC TGTAAAAGGA GCTAATCCAA ATACCGGCGA AGAAGAGGCA AGACATGCAT CAGATGATGA ACCTTTCTGT GCATTAGCAT TTAAAGTTAT GGCAGACCCT TATGCAGGAC AGCTAACTTA CTTTAGAGTT TACTCCGGTT CAGTAAAAGC TGGTCAAACT GTTTATGTTT CAAACAAAGG TAAAAAGGAA AGAATTGGTA GAATCTTAAG AATGCATGCT AACCAAAGAG AAGAGATTTC AGAAGTTTAT GCTGGAGATA TCGCAGCTGC TGTTGGTGTA GATGCAACCA CTGGTGATAC GCTTTGTGAT GAAAAAGCAC CTATTGTTCT TGAAAAAATG GAATTTCCAG AGCCGGTTAT TGCGATGGCT ATAGAACCAA AAACAAAATC AGACCAAGAA AAGTTATCTC AAGTTTTAAA TAAATTTATG AAAGAGGACC CAACATTTAA AGTTTCTGTA GACCCAGAAA CAAACCAAAC ATTAATCCAC GGAATGGGTG AATTACACCT TGAAATCATA ATAGATAGAA TGAAAAGAGA ACACAAACTT GAAGTTAACG TAGGTAAACC ACAGGTTGCA TACAAAGAAA CTATCAAGAA AAAAGCAACG GCAGAAGGTA AATTTATAAG ACAGTCTGGT GGTAGAGGTC AATACGGTCA CGTTTGGATA GATATAGAAC CAAATCAAGA AAAAGAATAT GAGTTTGTAG ATAAAATCGT TGGTGGTGTG ATACCAAAAG AATTTATCCC AGCTGTAGAT GAAGGTATTA GAGAAGCAAT GAACCAAGGT GTCGTAGCAG GCTATCCTGT TATAAACGTA AAAGCTACAC TTTTTGACGG TTCTTTCCAC GAAGTTGACT CATCTGAAAT AGCGTTCAAA ATAGCTGGTT CTATGGCATT TAGAGATGCT ATGAAAAAAG CAGACCCAGT ATTGCTTGAG CCTATCATGC ACGTCGAAGT AGATACACCT GAAGAATACA TGGGTGATGT AATGGGTGAC CTTAACAGAA GAAGAGGAAG AATCCTCGGA ATGGAAAAAA GAGGGAATAC TGTAACTATT AAAGCTGAAG TTCCATTGGC AGAAATGTTT GGATATGCTA CAGATTTAAG GTCTATTACA CAAGGTAGAG CGACGTTTGT AATGACATTT GAAAGATATG AAGAAGTTCC AAGACATATT GCTGAACAAG TTGCAGGACA AAGAAGTAAA GCTAACGCTT AA
|
Protein sequence | MPRQVPIEKL RNIGIVAHID AGKTTTTERI LFYTGKTYKI GEVHEGAATM DWMEQEKERG ITITSATTAA YWKGYQLNII DTPGHVDFGV EVVRSMKALD GIVFVFASVE GVQPQSEANW RWADRFGVPR IAFVNKMDRV GANFFGVYED MKKKLGTNPV PIQVPIGAED NFKGVVDLFN MKAIIWEGDE LGAKFEEKEI PAELIDLAQE WREKMIEAIV ETDESLMEKY FAGEEIPAED LKKALRKATI ERKLVPMLCG TAFKNKGIQP MLDAVIDFLP SPVDVPPVKG ANPNTGEEEA RHASDDEPFC ALAFKVMADP YAGQLTYFRV YSGSVKAGQT VYVSNKGKKE RIGRILRMHA NQREEISEVY AGDIAAAVGV DATTGDTLCD EKAPIVLEKM EFPEPVIAMA IEPKTKSDQE KLSQVLNKFM KEDPTFKVSV DPETNQTLIH GMGELHLEII IDRMKREHKL EVNVGKPQVA YKETIKKKAT AEGKFIRQSG GRGQYGHVWI DIEPNQEKEY EFVDKIVGGV IPKEFIPAVD EGIREAMNQG VVAGYPVINV KATLFDGSFH EVDSSEIAFK IAGSMAFRDA MKKADPVLLE PIMHVEVDTP EEYMGDVMGD LNRRRGRILG MEKRGNTVTI KAEVPLAEMF GYATDLRSIT QGRATFVMTF ERYEEVPRHI AEQVAGQRSK ANA
|
| |