| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0291 |
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| Symbol | rplC |
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| ID | 6331063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 294955 |
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| End bp | 295635 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656571 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_001930490 |
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| Protein GI | 188996239 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0279726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAAAAG GCATAATTGG AAAAAAAATA GGAATGACGA AAGTTTTTGT TAATGGAAAG
GCAATTCCTG TAACAGTTAT ACAAGCTGGA CCTTGCTATG TGGCTTATAC AAGAACCCAG
GAAAAGGATG GGTATAATGC AGTTGCTCTT ACCTTTGGAG AAAGAAAAGA AAAAAATATT
CCAAAGCCAT TACTTGCAAT TTTCAAAAAA GCTAACATAA AACCTGCAAA AGTTATTAAG
GAATTTCCTT TAAAAGATGG AGAAACCGTA GAGCCTGGAC AAGAAATTAG GATCGAAAAT
GTTTTTGAAA AAGGTGATTT AGTAGATATC ACAGGCAAAT CAAAAGGTAG AGGTTTTACC
TCTGTAATGA AAAGATGGGA CTTTGCAGGA TTTCCTAAAT CTCATGGTCA TAGATATCAC
AGAGCTGTAG GTTCTATCGG TTGTAGAACA GAGCCAGGTA GAGTTTGGAA GACAAAGAGA
ATGGCGGGTC ATTACGGTAA TGAAACAGTA ACAGTACTTG GCCTTGAAGT TGTTGATATA
ATTCCAGAAA AAAATGTAAT ATTAGTAAAA GGGTCTGTAC CTGGTGCTCC AAACTCAACA
GTATTCTTAA AACAAAGTGT AATAGCTGAT AGAAGAAAAG GAAAATTAAA ATTAGCAAAA
TCAAAAGCAA TGTATGCTTA A
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| Protein sequence | MPKGIIGKKI GMTKVFVNGK AIPVTVIQAG PCYVAYTRTQ EKDGYNAVAL TFGERKEKNI
PKPLLAIFKK ANIKPAKVIK EFPLKDGETV EPGQEIRIEN VFEKGDLVDI TGKSKGRGFT
SVMKRWDFAG FPKSHGHRYH RAVGSIGCRT EPGRVWKTKR MAGHYGNETV TVLGLEVVDI
IPEKNVILVK GSVPGAPNST VFLKQSVIAD RRKGKLKLAK SKAMYA
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