Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0288 |
Symbol | rplB |
ID | 6332765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 293179 |
End bp | 294003 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 642656568 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_001930487 |
Protein GI | 188996236 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.101113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTTA GAAAATTAAA ACCAGTAACA AATGGAACAA GACATGCAAT CCTATATGAT TTTGCTGAAA TTACAAAATC AGAACCGGAA AAATCATTAG TTGAGCCACT TAAAAAGCAT GCAGGAAGAA ATAATCAAGG TAGAATCACT GTAAGACACA GAGGTGGCGG TCATAAAAGA CTATACAGAA TTATAGATTT CAAAAGAGAC AAATGGGGAA TTCCTGCAAA AGTTGCGGCG ATTGAGTATG ACCCAAACAG AAGTGCAAGA ATCGCTCTTT TACACTACTT AGATGGTGAA AAAAGATACA TCATCTGGCC AGAAGGATTA AAAGTGGGTG ATTATATAAT GGCTGGACCG GATGCAGAGA TTAAAGTCGG CAATGCACTA CCTCTTGAAA ACATACCGGT TGGTACACTT GTTCATAACA TTGAATTAAC ACCGGGTAAA GGTGGCCAGC TTGTTAGAGC CGCTGGAATG TCTGCTCAAA TACTTGGAAG AGAAGGCGAT TATGTACAAA TAAGATTGCC ATCCGGGGAG CTAAGATTGG TTTATAAAAA GTGCATGGCT ACGATTGGAG CAGTTGGTCT TGCTGAGCAT GAACTTTTAG AGCTTGGTAA AGCTGGAAGG TCAAGATGGC TTGGAATTAG ACCTACTGTT AGAGGTACTG CAATGAACCC AGCAGACCAC CCACACGGTG GTGGTGAAGG TAGAACTTTT GGTAAGCATC CAGTTTCTCC TTGGGGATTA CCAACTAAGG GATACAAAAC AAGGAGAGGT GCAAAATACT CTGATAAATT CATAATAAAG CGTAGAGGTA AATAA
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Protein sequence | MGVRKLKPVT NGTRHAILYD FAEITKSEPE KSLVEPLKKH AGRNNQGRIT VRHRGGGHKR LYRIIDFKRD KWGIPAKVAA IEYDPNRSAR IALLHYLDGE KRYIIWPEGL KVGDYIMAGP DAEIKVGNAL PLENIPVGTL VHNIELTPGK GGQLVRAAGM SAQILGREGD YVQIRLPSGE LRLVYKKCMA TIGAVGLAEH ELLELGKAGR SRWLGIRPTV RGTAMNPADH PHGGGEGRTF GKHPVSPWGL PTKGYKTRRG AKYSDKFIIK RRGK
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