| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0264 |
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| Symbol | rpsD |
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| ID | 6332739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 282238 |
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| End bp | 282852 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656544 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001930463 |
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| Protein GI | 188996212 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGTAGAT ATATTGGGCC ATTAACAAAA GTTAGTAGAA GATTAGGAGT TTTTGTTGGC
GGTGATATAG AATCTTTTCA AAAGAGAAAT TTTCCACCAG GTCAACATGG TAGAACTCAA
GGAAGAAAGA AGCTTTCAGA CTATGGAGTT AGATTGCAAG AAAAACAAAA ATTAAGATTT
TTATACGGCG GAATTAGAGA AGGACAATTC AAAAGATATT TTGAGAGAGC ATCTAAAGCG
GCTGGAAATA CTGGTACAGT ATTATTACAA TTACTTGAAA GAAGGCTTGA TAACGTTGTA
TACAGACTTG GTTTTGCAAA AACAAGGCTT CAGGCAAGAC AATTGGTAAA ACATGGCCAC
TTCTTAGTAA ACGGAAAAAA AGTAGACATC CCATCTTATG AACTTGATAA AGGCGATATT
ATTGAAGTTA GAGAAAAAAG CAAAAAATTA GAAGTTTTTA AAGAAAATTT AGAGAGTAGA
GATCCTCGTT CTGTTCCAAG ATGGTTGGAG ATCGATAAAG ACAATTTTAG AGGAAAGGTT
GTTGAAATTC CAGAGGAAAT TGAATTAGAA ATTCCAGTTA ACGTTCAGTA TATCATTGAG
TACTACTCGA TGTAA
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| Protein sequence | MGRYIGPLTK VSRRLGVFVG GDIESFQKRN FPPGQHGRTQ GRKKLSDYGV RLQEKQKLRF
LYGGIREGQF KRYFERASKA AGNTGTVLLQ LLERRLDNVV YRLGFAKTRL QARQLVKHGH
FLVNGKKVDI PSYELDKGDI IEVREKSKKL EVFKENLESR DPRSVPRWLE IDKDNFRGKV
VEIPEEIELE IPVNVQYIIE YYSM
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