| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0259 |
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| Symbol | |
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| ID | 6331011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 277277 |
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| End bp | 278866 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656539 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_001930458 |
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| Protein GI | 188996207 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG TCTTGGTCAC TGATGATATA TCTCCAAAAG GATTGGAAAT ATTAAGCAAC
GATGAAGAAA TAGACCTTGA TTATCAACCA GAGATTAAAT TTAATGAATT GCTTGAAATA
ATTAAAGATT ATGATGCGAT TATCACAAGA AGTAGAACGC CGGTTACAAA AGAACTTTTA
GAAAGAGCAG AAAAATTAAA GGTAATAGGT AGGGCTGGAG TAGGCGTTGA TAACGTAGAT
TTAGAAGAAG CTTCTAGAAG AGGTATTTTA GTTGTAAATA CTCCGGGGGC TAATACGATC
GGTGCTGCTG AAATCACAAT GGCGCATCTA TATGCAGTCT TAAGAAAGCT GCATTTAGCT
CATGACTCTG TAAAGGCTGG TGAGTGGAAA AGGTCAAAGT TTATGGGTGA AGAGTTAGAC
GGAAAGGTGG TTGGAATAAT TGGTCTTGGT AATGTTGGTT CTCAAGTTGC TATCAGATGT
AAAGCAGCAG GAGCAAAGGT TATAGCTTAT GACCCATACA TTCCAAAAGA AAAAGGTGAT
AGGCTCGGTG TTGAGATAAT AGACGATTTA CATGAGCTTA TAAAGATATC TGATATTATT
ACTCTTCATT GCCCATTAAC AGAAGAAACA AGAAATATGA TAGGAAAAAA AGAATTTGAC
CTTATGAAGA AAGGTGTTTA TTTCATAAAC TGTGCAAGAG GCGGGATCGT TGATGAAGAT
GCTTTGTATG ATGCAATTCA AGAAGGCAAA ATAGCCGGGC TTGGACTTGA TGTATTCTCA
AAAGAGCCAC CGGATGAAAG AATCAGAAGA TTATTTGAAT TTCCAAATAT TAGCCTATCT
CCACACATTG GAGCAAATAC TTATGAATCA CAAGATAACG TGGCAATTAA AATAGCTCAG
TATGTTATAG CTGCTTTAAA AGGTCAGTTT GTTGAGGTGG CAGTAAATGC ACCATTTACA
ATAACAGAAG GATTTGAAAA CATAAAAGCA TATCTTGAAC TAGCAGAAAA GCTTGGAAGC
TTTTTAACTC AGTATGCAGG AGGACATTTT ACAGAAATAA ACATAGAAGT TAGAGGAAGT
ATAAAACAGC ATATAGAACC GATAACAGCA TTTTTCTTAA AAGGCTTTTT ATCGCCAATT
TTAGATACAC CTGTTAATAT AATTAATGCA CCTTTCATAG CAAAAGAAAG AGGGGTTAAT
ATCGTCAAAT CTACAAGAGA GGCAGGGCTT AACTTTAAAG AGTTTATAAA AGTTACTGCA
AGGTCTAAAG ATAAAGAAGT GTCTGTCGGT GGAACTGCTC TTTATGACAA ATTCCCAAGA
ATCATGATGG TTGATAACTA CTGGATAGAT ATTGAACCAC AAGGTGTGAT TTTAATGTTT
GAAAATAAAG ACGTTCCTGG TGTAATCGGA AAACTTGGGA CATTGCTTGC AAAACATAAT
GTAAACATAG CAGGATTTAG ACTTGGAAGA TTAGAAAAGG GTAAAATAGC TCTTGGAGCT
CTTCAGCTTG ACGATAGATT AAATGAAGAA GTTTTAGAGG AAATTCATCA AATACCAGAA
ATTATAAAAG CAAAACAAGT TATATTATAA
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| Protein sequence | MYKVLVTDDI SPKGLEILSN DEEIDLDYQP EIKFNELLEI IKDYDAIITR SRTPVTKELL
ERAEKLKVIG RAGVGVDNVD LEEASRRGIL VVNTPGANTI GAAEITMAHL YAVLRKLHLA
HDSVKAGEWK RSKFMGEELD GKVVGIIGLG NVGSQVAIRC KAAGAKVIAY DPYIPKEKGD
RLGVEIIDDL HELIKISDII TLHCPLTEET RNMIGKKEFD LMKKGVYFIN CARGGIVDED
ALYDAIQEGK IAGLGLDVFS KEPPDERIRR LFEFPNISLS PHIGANTYES QDNVAIKIAQ
YVIAALKGQF VEVAVNAPFT ITEGFENIKA YLELAEKLGS FLTQYAGGHF TEINIEVRGS
IKQHIEPITA FFLKGFLSPI LDTPVNIINA PFIAKERGVN IVKSTREAGL NFKEFIKVTA
RSKDKEVSVG GTALYDKFPR IMMVDNYWID IEPQGVILMF ENKDVPGVIG KLGTLLAKHN
VNIAGFRLGR LEKGKIALGA LQLDDRLNEE VLEEIHQIPE IIKAKQVIL
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