Gene SYO3AOP1_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0246 
Symbol 
ID6331186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp266244 
End bp266693 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content32% 
IMG OID642656526 
Productribonuclease H 
Protein accessionYP_001930445 
Protein GI188996194 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TAAAAATTTT TGCCGATGGT TCAAGTCTTG GAAATCCTGG ACCCGGTGGT 
TATTGTAGTA TCATAACAGA CGGAGAAAAA AAAGCTATTG TAAAAGGTGG AGAAAAGCAA
ACTACGAACA ATCGGATGGA ATTGATGGCA GTAATAAAAG CCCTTGAAAA GATTAAAAAT
AGCTATAATA TAGAGCTTTA CACTGATAGC AAATATGTAG TTGATGGTAT AAACAGCTGG
CTTGAAAAAT GGAAGAAAAA CGGCTGGAAA ACATCAAATA AGAAAGATGT GCTTAACATA
GATTTATGGC AAAAATTAGA CCAGCTTTTA CAAAGACATA ATGTAAAAGC ATATTGGATT
AAAGGACATA ACGGACATCC TGAAAATGAA TACTGTGATA AAGTAGCAAA AATGGAAGCA
TTAAAGTATA TGCAAAATGA AGAAAAATAA
 
Protein sequence
MKTIKIFADG SSLGNPGPGG YCSIITDGEK KAIVKGGEKQ TTNNRMELMA VIKALEKIKN 
SYNIELYTDS KYVVDGINSW LEKWKKNGWK TSNKKDVLNI DLWQKLDQLL QRHNVKAYWI
KGHNGHPENE YCDKVAKMEA LKYMQNEEK