| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0243 |
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| Symbol | |
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| ID | 6332257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 261668 |
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| End bp | 263344 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642656523 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001930442 |
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| Protein GI | 188996191 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAA GAACGGATAT AGAAACGATT CTGCTTATTG GGTCAGGTCC GATAATAATC
GGTCAAGCTG CAGAGTTTGA CTACTCAGGA ACGCAAGGAG CAAAAGCATT AAAAGAAGAA
GGATATAGAG TTATTCTCGT AAATTCAAAT CCAGCAACCA TCATGACAGA CCCAAACATA
GCAGATAAAA CATACATAGA ACCATTGATT ACACCGGTAT TAGAGAAAAT CATAGAAAAA
GAAAGACCGG ATGCAATACT TCCCACACTT GGTGGACAGA CAGCATTAAA CCTTGCAATA
GATTTGTATG AAAAAGGAAT TTTAGATAAA TACAACGTTG AGCTTATAGG TGCAAAGTAT
GAAGTCATAA AAAAAGCAGA AGATAGAGAT TTATTTAAAA AAGCTATGGA AAATATCGGT
CTGTCTATGC CAAAAAGTGC AGTAGTAAAA TCTATTGCAG AAGCTGAAGA AGTTATTGAT
TGGATAGGCT TTCCGGTAAT CATAAGACCA TCTTTTACAC TTGGTGGTAC AGGTGGTAGT
ATAGCATACA ACAGAGATGA ATTTTATCCA AAAGTAAAAG CAGGTCTTGA TGCATCTCCA
ATTCATGAAG TGCTACTTGA AGAGTCGGTG ATTGGTTGGA AAGAGTTTGA GATGGAAGTT
ATGAGAGATA AAAATGATAA TTGTGTAATC ATCTGTTCAA TAGAAAACTT AGACCCAATG
GGCGTTCATA CAGGAGATAG TATAACAGTT GCTCCTGCAA TAACGCTGTC AGATAGAGAA
TATCAGATCT TAAGAAATTA CTCTATAGCG GTAATGAGAG AGATTGGGGT TGAGACAGGT
GGTTCTAACG TTCAGTTTTC ACAAAATCCA AAAACCGGCG AATTCTATGT AATAGAGATG
AACCCACGGG TTTCTCGTTC ATCAGCTTTG GCATCAAAAG CTACAGGCTT TCCAATAGCA
AAGATTGCAG CAAAGCTCGC TGTTGGATAC ACGCTTGATG AACTGCCAAA CGACATTACT
AAAAAAACAC CGGCATCTTT TGAACCAACG ATAGATTATA TAGTTGTAAA AATACCAAGA
TTTGATTTTG CAAAATTCCC AGAAGCAGAC CCAACCCTTA CAACCATGAT GAAATCCGTC
GGCGAAGTTA TGGCTATCGG AAGAACGTTT AAAGAAAGTC TGCAAAAAGC GTTAAGAAGT
CTTGAACTTG GAAGATATGG ATTCTACATG GGATTGGAAA ATAAAGATGA GCAAACATTA
AAAGAAAAAA TAATAAAGCC AAATCCAGAC AGGCTTTGGT ATATTGCTGA AGGTTTTAGA
AGAGGCTATA GCATAGATGA GATAAACAGA TTATCTCACA TAGATAAATG GTTTTTAAGT
CAAATCAAAG AAATCATAGA TTATGAGCTT TATTTATCTA CAAAGGATAT AAACACAATC
ACAGACCAAG AGCTTGAAAA AGCTAAGCAA TGGGGATTTT CTGATAGAGA GCTTGCAAGA
CTTCTAAAAA CAACAGAGGA AGAGATTAGA AAAAGAAGAA TAGAGGTAAG CTATAAAGTT
GTTGATACGT GTGCGGCAGA GTTTGAAGCA TTTACGCCTT ACTACTATTC ATCTTATGAA
AGTCTTTCCG GAAAGGTTAA AGATGATAAT GTAATAACCT TTAGAGTATC TGAATAA
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| Protein sequence | MPKRTDIETI LLIGSGPIII GQAAEFDYSG TQGAKALKEE GYRVILVNSN PATIMTDPNI
ADKTYIEPLI TPVLEKIIEK ERPDAILPTL GGQTALNLAI DLYEKGILDK YNVELIGAKY
EVIKKAEDRD LFKKAMENIG LSMPKSAVVK SIAEAEEVID WIGFPVIIRP SFTLGGTGGS
IAYNRDEFYP KVKAGLDASP IHEVLLEESV IGWKEFEMEV MRDKNDNCVI ICSIENLDPM
GVHTGDSITV APAITLSDRE YQILRNYSIA VMREIGVETG GSNVQFSQNP KTGEFYVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLAVGY TLDELPNDIT KKTPASFEPT IDYIVVKIPR
FDFAKFPEAD PTLTTMMKSV GEVMAIGRTF KESLQKALRS LELGRYGFYM GLENKDEQTL
KEKIIKPNPD RLWYIAEGFR RGYSIDEINR LSHIDKWFLS QIKEIIDYEL YLSTKDINTI
TDQELEKAKQ WGFSDRELAR LLKTTEEEIR KRRIEVSYKV VDTCAAEFEA FTPYYYSSYE
SLSGKVKDDN VITFRVSE
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