Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0240 |
Symbol | |
ID | 6332254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 257729 |
End bp | 258688 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642656520 |
Product | 2-hydroxyacid dehydrogenase |
Protein accession | YP_001930439 |
Protein GI | 188996188 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTG CAATACTTGA TGCTGCAACC CTTGGTGATG ATGTTAATTT AGATATTTTT AGAGACTTTG GATATCTTGA AATATATCAA ATTACAAACT CTAAGCAGGA AGCCGTAGAA AGAGTAAAAG ATAAGACAAT AATAATTACT AACAAAGTAA TCATTGATAA AGAAGTTATG GATAATGCGC CTTATCTTAA ATTAATATGC GTTGCTGCAA CCGGATATAA CAACGTAGAT ATAGATTATG CAAAGCAAAA AGGAATTGCT GTTACTAATG TGTCGGGATA CTCAACTAAC AGCGTTGTTC AGCATACTTT TGCAATGCTC TTTTATCTTT TAGAAAGTCT TAGATATTAC GATGATTATG TTAAATCAGG AGAGTATGCT AAAAGCCCTA TTTTTACACA TCTTGGCAGA CCATTTTGGG AAATAAGTGG TAAAGTTTGG GGCATAATAG GACTTGGAAC CATTGGACAA AAGGTTGCAC AGGTAGCAGA AAGCTTTGGA TGTGATGTAA TTTATTACTC AACTTCCGGA AAAAATTTTA ATCCAAACTA TACACATAAA GGCTTAGATG AGCTCTTATC AACATCTGAT ATAATCTCAA TCCATGCACC TTTAAATCAA AATACTAAAA ATTTAATCAC GTATGAAAAA CTAAAATTGA TGAAAAAATC TGCAATTTTG CTTAATCTTG GAAGGGGTGG AATTGTTAAC GAAGCGGATT TAGCAAAAGC TTTAGATGAA GGATTGATCG CAGCAGCAGG CTTAGATGTC CTTGAAAAAG AGCCAATAGA CCCAAACAAT CCATTACTTC ATATAAAAAA TAAAGATAGG TTATTAATAA CTCCACATAT AGCATGGACA AGTATAGAAG CAAGAAATAA GCTTGTTAAA GAAATATATC TCAATATAGA AAGCTTTTTA AGAGGAAAAG AGAGGAACAG AATTTGTTAA
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Protein sequence | MKLAILDAAT LGDDVNLDIF RDFGYLEIYQ ITNSKQEAVE RVKDKTIIIT NKVIIDKEVM DNAPYLKLIC VAATGYNNVD IDYAKQKGIA VTNVSGYSTN SVVQHTFAML FYLLESLRYY DDYVKSGEYA KSPIFTHLGR PFWEISGKVW GIIGLGTIGQ KVAQVAESFG CDVIYYSTSG KNFNPNYTHK GLDELLSTSD IISIHAPLNQ NTKNLITYEK LKLMKKSAIL LNLGRGGIVN EADLAKALDE GLIAAAGLDV LEKEPIDPNN PLLHIKNKDR LLITPHIAWT SIEARNKLVK EIYLNIESFL RGKERNRIC
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