Gene SYO3AOP1_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0240 
Symbol 
ID6332254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp257729 
End bp258688 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content33% 
IMG OID642656520 
Product2-hydroxyacid dehydrogenase 
Protein accessionYP_001930439 
Protein GI188996188 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTTG CAATACTTGA TGCTGCAACC CTTGGTGATG ATGTTAATTT AGATATTTTT 
AGAGACTTTG GATATCTTGA AATATATCAA ATTACAAACT CTAAGCAGGA AGCCGTAGAA
AGAGTAAAAG ATAAGACAAT AATAATTACT AACAAAGTAA TCATTGATAA AGAAGTTATG
GATAATGCGC CTTATCTTAA ATTAATATGC GTTGCTGCAA CCGGATATAA CAACGTAGAT
ATAGATTATG CAAAGCAAAA AGGAATTGCT GTTACTAATG TGTCGGGATA CTCAACTAAC
AGCGTTGTTC AGCATACTTT TGCAATGCTC TTTTATCTTT TAGAAAGTCT TAGATATTAC
GATGATTATG TTAAATCAGG AGAGTATGCT AAAAGCCCTA TTTTTACACA TCTTGGCAGA
CCATTTTGGG AAATAAGTGG TAAAGTTTGG GGCATAATAG GACTTGGAAC CATTGGACAA
AAGGTTGCAC AGGTAGCAGA AAGCTTTGGA TGTGATGTAA TTTATTACTC AACTTCCGGA
AAAAATTTTA ATCCAAACTA TACACATAAA GGCTTAGATG AGCTCTTATC AACATCTGAT
ATAATCTCAA TCCATGCACC TTTAAATCAA AATACTAAAA ATTTAATCAC GTATGAAAAA
CTAAAATTGA TGAAAAAATC TGCAATTTTG CTTAATCTTG GAAGGGGTGG AATTGTTAAC
GAAGCGGATT TAGCAAAAGC TTTAGATGAA GGATTGATCG CAGCAGCAGG CTTAGATGTC
CTTGAAAAAG AGCCAATAGA CCCAAACAAT CCATTACTTC ATATAAAAAA TAAAGATAGG
TTATTAATAA CTCCACATAT AGCATGGACA AGTATAGAAG CAAGAAATAA GCTTGTTAAA
GAAATATATC TCAATATAGA AAGCTTTTTA AGAGGAAAAG AGAGGAACAG AATTTGTTAA
 
Protein sequence
MKLAILDAAT LGDDVNLDIF RDFGYLEIYQ ITNSKQEAVE RVKDKTIIIT NKVIIDKEVM 
DNAPYLKLIC VAATGYNNVD IDYAKQKGIA VTNVSGYSTN SVVQHTFAML FYLLESLRYY
DDYVKSGEYA KSPIFTHLGR PFWEISGKVW GIIGLGTIGQ KVAQVAESFG CDVIYYSTSG
KNFNPNYTHK GLDELLSTSD IISIHAPLNQ NTKNLITYEK LKLMKKSAIL LNLGRGGIVN
EADLAKALDE GLIAAAGLDV LEKEPIDPNN PLLHIKNKDR LLITPHIAWT SIEARNKLVK
EIYLNIESFL RGKERNRIC