| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0237 |
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| Symbol | |
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| ID | 6332250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 254227 |
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| End bp | 255510 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642656516 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001930436 |
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| Protein GI | 188996185 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.124528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACAAG AACTACTTAG GGGGTTTCAG GAAAAGATTC CAAAAGAAAA ATGGAAAATA
GACTCAAAAG ATATTGAGAT AATTTTTGAA GATTTTTCTA AACATTTTGA GACAAATGTA
TCTTTAAAAA TTATATCTGA AGAAGACAGA AAGATATTAT TTCGTTTCAT TAAAAGGTAT
ATAAAAAATT ATTTGCCTGT ATATCCTGAT GAAAATAGAA TAAAACTTTT GCGAAGACTG
GGAGAAAGAT TATTAATTAA ACTAGTCTCA GAATTTTCTG TTGTTGAAGT GTATAAGATT
ATACTAAGGG CTGTTGAAAA GATAGAAGAT GAGGGCAAAA GGGAAATTCT AAAAGAAAAA
ATTAGCTTTG ATTTTATAAT CGTTATTTCA CCCTACGTTA ATTTATCTTA TAAAGAGGAT
AAAAAAATAT TAAAAGATAG TAGTTTAGAG TATGTATTAA GTGTAGAAAA AGGAATAAAT
ATTCATTTAA AAATAAAAAA TAAATTATTG AGATTTTTAT TCTCCGGGAA AAACCATGTT
AAAATCAAAT CTGCCGAAGA CTGTGAATTC ACTCAGTGGT TAAGGGATAG TTTGACAAAT
TTAGTAAATA ACAAAAATAT AATCAAAGAA ATAGAATCTT TGCATGAAAA ATTTCATCTT
ATGGCTCAAA AAATCTTAGA GAGTAAAGAC AATTTTACCA AAATATTACT TCTTAAAGAT
TTAGAGGATA ATTCTTTAAA ATTAATCTAT CTATTGAATA AAATCTATAC AGAAAATCTA
AGCCACATAG CAATTTACGA TAAATTAACA CAAGTTTACA ATAGAGCTTT GCTGGATAGT
ATTTTATATA AATCAGCTAA ATATGCAAAA AGACATAAAT TGCCTATTTC AATTATTATG
TTAGATATAG ATAATTTTAA AGGCATAAAT GATACATATG GACATTTAGA GGGTGACAGA
GTATTAAAAA CGGTCGCTTC TATAATAAAA TATTCAATTA GAGAATCGGA TTATGTTTTT
AGATACGGTG GAGAAGAATT TTTAATACTT TTGCCAAACA CAGACATAAA TGGCGCCATT
GTTGTTGGAG AAAAAATTAG AAGAAATATA GAAAATTTTG ATTTTGGTCT TGATAGAAAA
GTTACAATAA GCTGTGGCAT AAAGCAAATA GAAAATTTTG ATAATCCTTA TTTGGATATG
GAAGAAACCG ATAAATATTT ATATATAGCA AAAAAATCAG GTAAAAATAG GTGTATCTAT
GGAAATATTA TACTCACCAG CTAA
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| Protein sequence | MLQELLRGFQ EKIPKEKWKI DSKDIEIIFE DFSKHFETNV SLKIISEEDR KILFRFIKRY
IKNYLPVYPD ENRIKLLRRL GERLLIKLVS EFSVVEVYKI ILRAVEKIED EGKREILKEK
ISFDFIIVIS PYVNLSYKED KKILKDSSLE YVLSVEKGIN IHLKIKNKLL RFLFSGKNHV
KIKSAEDCEF TQWLRDSLTN LVNNKNIIKE IESLHEKFHL MAQKILESKD NFTKILLLKD
LEDNSLKLIY LLNKIYTENL SHIAIYDKLT QVYNRALLDS ILYKSAKYAK RHKLPISIIM
LDIDNFKGIN DTYGHLEGDR VLKTVASIIK YSIRESDYVF RYGGEEFLIL LPNTDINGAI
VVGEKIRRNI ENFDFGLDRK VTISCGIKQI ENFDNPYLDM EETDKYLYIA KKSGKNRCIY
GNIILTS
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