| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0232 |
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| Symbol | |
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| ID | 6331420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 249492 |
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| End bp | 250751 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656510 |
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| Product | RNA methyltransferase, TrmA family |
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| Protein accession | YP_001930431 |
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| Protein GI | 188996180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00000193721 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTAA AAATAGACAA AGTTGTTTAC GGTGGATACG GATTAGCTAA AGAAAACAAT
ACAGTATATT TTGTTCCTTA CACTTTGCCG GGTGAAGAAG TTGAAATAGA AGTAGTAGAA
GATAAAAAAG ATTATAAGCT TGGAAGATTG GTTGATGTAT TAAAACCATC CGAGTATAGA
GTAAAACCAG CATGTGAATA CTTTACGGCA TGCGGTGGAT GTGATTTTCA GCACACGACT
TACGAAAACC AGCTTTTATT GAAAAAAGAA ATTTTAAAAG ACCAGCTTCT AAGAATTGGA
AAGATTGAAA CAGAAATAGA AAAAATAATT CCATCAAAAG AGCCTTTTAG ATACAGAAAC
AGAGCCCAAT TAAAGTTTGA TGGAAAAAAT CTTGGCTTTT ACAAAAAAGA TTCAAACGAT
TTAGTTAATG TAGATAACTG CCTTTTGTTA AAAGAAGATA TAGAAAAACT ACTAAACCCA
TTAAAAAAAT TTCTCATAAA GTATGCAATA ATGCCATCTA ACATTCATAT TTTCTCAAAC
ACAAAAGAAG AAAAGCTAAT TAGATTTGAA TTTTTAGATG AAAGTCAGTT TTCAAACATC
ATCTACGATA TGAATATCTT CAGAGAAGAG ATTGATGAAA AAATCAAAGG AATAGGTTTT
TATGCCAAAC ATAAAAGATA TTCCTTACTT GGTGAGGATG TAGTCTTTGA AAACATTGGA
GATTATAAAT TTAGAGTGAG CATGGACAGC TTTTTTCAGG TAAATGTATA TCAGATAAAA
AATCTGATTG ATGAAGTAGT CAGTGAAATT AAAGACAAGG GTTTTAAAAA ATTGGTAGAT
TTTTACTGTG GAGTTGGAAC GCTAACAATA CCAGCATCAA AGTATGTAAA AGAAGCCCTT
GGAATAGAAA GCAACGAAGA AGCCGTAAAA GATGCAAAAG CAAACATAAA ACACAACAAA
TTAAAAAATG TAAAATTTTT AAAAACCCAA ACAGAAAAAG GTTTAAAGTA TGCAAAAGAC
TTTCTACCAG AAGTAGTAAT TTTTGACCCA CCCCGTAGCG GCTTAAACAG AAAAATAGTA
AACGAAATTT CACAAATTCA AACAGTTAGA AAAATTATTT ACGTTTCCTG CGACCCGTCA
ACTTTATCAA GAGACTTGAG ACAGTTTGTA GAAAATGGAT TTAAGTTAAA AAAAGTTAAA
TTAATAGACA TGTTCCCTCA AACCTATCAT ATTGAGAGTA TAAGCGTATT GGAAAGATAG
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| Protein sequence | MKLKIDKVVY GGYGLAKENN TVYFVPYTLP GEEVEIEVVE DKKDYKLGRL VDVLKPSEYR
VKPACEYFTA CGGCDFQHTT YENQLLLKKE ILKDQLLRIG KIETEIEKII PSKEPFRYRN
RAQLKFDGKN LGFYKKDSND LVNVDNCLLL KEDIEKLLNP LKKFLIKYAI MPSNIHIFSN
TKEEKLIRFE FLDESQFSNI IYDMNIFREE IDEKIKGIGF YAKHKRYSLL GEDVVFENIG
DYKFRVSMDS FFQVNVYQIK NLIDEVVSEI KDKGFKKLVD FYCGVGTLTI PASKYVKEAL
GIESNEEAVK DAKANIKHNK LKNVKFLKTQ TEKGLKYAKD FLPEVVIFDP PRSGLNRKIV
NEISQIQTVR KIIYVSCDPS TLSRDLRQFV ENGFKLKKVK LIDMFPQTYH IESISVLER
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