Gene SYO3AOP1_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0227 
Symbol 
ID6331415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand- 
Start bp244611 
End bp245237 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content34% 
IMG OID642656505 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_001930426 
Protein GI188996175 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000023759 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTAA CATCAAAAAG AAAACAGTTA AAAAAAGTAT ATGAACCTGT TGGAGTCCTC 
CTTGCAAGGA GGACCAAAAT CACACCTAAC ATTATAACCA TAATATCTGT TATCATCGGA 
GTTTTTGCCG CAATCTCTTT CTTTAAAGAA AAGCCACTTC TTGGTGCAAC ACTACTATTT 
ATAAGCGGAT TTTTTGACCT TTTGGATGGT GTCGTTGCAA GAGAAAGAGA AAAAGCATCT 
AAGTTTGGTG CAGTGTTTGA CTGGCTTGCT GACAAATTTG TAGATGGTTT TTTACTATTT 
TTTATTGGCA TTACATACTC AACACCATAT TTAACAGCAA TAGCAATAAC AGCAAATATG 
CTCCACACAT TCATAAAACC CGTTGCATAC GCAGAAATTG GCTTTTCTAA CAGAACAAAA 
GGAAAGATAG ATGACCCATT AGAAGGTGTA GGATTTTTTG GAAGACCGGA GACATTGCTT 
ACAATAATAG TTTTTTCTAT ATTTGAACAT TTTAAAATCT TTGGTGGTCT TGAGTTTGGA 
TTTGTAGTAA TAACGGCATT GACTACTCTT TCTTTATTAC AAAGAATAGT ATACTTGTAC 
ATCAAGTACA ACAAAGATTA TGACTAA
 
Protein sequence
MNLTSKRKQL KKVYEPVGVL LARRTKITPN IITIISVIIG VFAAISFFKE KPLLGATLLF 
ISGFFDLLDG VVAREREKAS KFGAVFDWLA DKFVDGFLLF FIGITYSTPY LTAIAITANM 
LHTFIKPVAY AEIGFSNRTK GKIDDPLEGV GFFGRPETLL TIIVFSIFEH FKIFGGLEFG 
FVVITALTTL SLLQRIVYLY IKYNKDYD