| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0226 |
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| Symbol | |
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| ID | 6331414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 243936 |
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| End bp | 244601 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656504 |
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| Product | 2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1-reductase |
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| Protein accession | YP_001930425 |
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| Protein GI | 188996174 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.000414817 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAC CTTATGTAAT AATTGTATCT GAAGTTACGG TAGATGGTAA GTTAACACTT
AGTAAAGGTG TTTCTTCAAA AGAAATCATG AAATTTATGG ATGAAGAAGC TAATCGATAC
CTTCACGAAA CACGGGCAAA AGTTGATGGC ATAATGGTAG GAGCAGAAAC TATCAGAACA
GACAATCCAT ATCTCACAGT AAGGTATGTA TCAGGAAAAA ATCCAACAAG AATAATACCA
ACATCAACTG CAGATATTCC CCTGGATGCA AACATTCTCA AAAAAGATTC TCCAACTATC
ATTGTAACAA CAGAAAAAGC TCCGGAAGAA AGAGTAAAAG CGTTGTCTGA AAAAGTTGAA
GTAATTGTAG CCGGAAAAGA AGAAGTAGAT TTAATCAAAA TGATGGATAT TCTATACAAT
AAAGGAATCC GTAATTTAAT GGTAGAAGGT GGGTCTACTT TAAATTGGAA CTTAATAAAA
AATGGTTTGG TAGATGAGAT AAGAATCATC CATATGCCTT TTATAGTAGG TGGAACAGAT
ACTCCTACAT TGGTCGGTGG TGAAGGATTT AAATCCTTAG AAGAAGTTGT AAAACTTAAA
CTTAGAGCAC ATTTTATGAG AGGATCTCAT CTTATCACGG AATGGGAAGT TAAGTATGAA
GGTTAA
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| Protein sequence | MKRPYVIIVS EVTVDGKLTL SKGVSSKEIM KFMDEEANRY LHETRAKVDG IMVGAETIRT
DNPYLTVRYV SGKNPTRIIP TSTADIPLDA NILKKDSPTI IVTTEKAPEE RVKALSEKVE
VIVAGKEEVD LIKMMDILYN KGIRNLMVEG GSTLNWNLIK NGLVDEIRII HMPFIVGGTD
TPTLVGGEGF KSLEEVVKLK LRAHFMRGSH LITEWEVKYE G
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