| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0197 |
|---|
| Symbol | |
|---|
| ID | 6331395 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 214506 |
|---|
| End bp | 215567 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 642656475 |
|---|
| Product | type IV pilus assembly PilZ |
|---|
| Protein accession | YP_001930396 |
|---|
| Protein GI | 188996145 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGA GAAAACCAGT TGTAGAAGGT TATCAGAAAG CCGTAGAAAA ATTATCTGGT
GTTGATATAA ATGCAATAGT TTTTTTGCTT TTTATAATTT TAATTATTAT TCTCGCTGTT
TTATTTTTAA ATAGTTTAAG TAAAAAACTT AAAGCGAAAT ACCATTATTC AGAATTTGTA
AAATATGCTA AAGAGAAAGA GTTGAGCGAT GAGCAAGTAT CTATTCTTTG GGATTATTCT
AAAAAGATGG GTAGAGACCC ATTTTTAGCT TTAGAGTTTA AATCACCATT TGAGAAAGTT
GTTGACCTTT ATATAAAGGA TAATCCAAAT TTTAATGAAA ATTTAATCAA AGATATGAGA
GAAAAGCTTG GATTTGATGT CGTACCATCT TTTGTTCCAA TCACTGTCAC AAAAGATATT
GATCTTTTCC AAGGAGGAAG GATTAAATTA GAAGATGGAA GAAGTTTTAA TGTTGTCTTA
TATGACAAAG ATGAATTATA TATGTACTGG GCAATAACTG ATAAAAATGT ACCGAATTTA
AATGTTGGTG ATAAGGTAAA AATATCTTTT ATAAGAAAAT CAGATGGTGC TTATGTTGTT
GAGGGGCAAA TAGAGGATAT CTTGAAAGAA AGTGGAAATG TTATATTAAA ATTTCCTCAC
ACATTTGAAA TTCTAAGAAT ACAAAGAAGA GAATATCCGA GAATAGATAC AGATATAGAA
GCTGTATTAG GTAAAAAAAT AAAGGAAGAT GATAAAGAAA TCATAAAGTG GCATATTGGT
AGAATTCTTG ATATAAGCCC ATCTGGTGCA AGATTTTGCG TAAGTGTAGA AGAAAAAAAT
ACATTAAACC TACGAATTGG GGATGAAATT ATATTAACAT TTACATTAGA GGAAAAAGAT
TTTCAGTTGA CAGGTGATGT TGTAAATGTT TATGAAAAGC AAAAGATTAT TTGTTACGGT
ATTAAATTTA AAGAAATTAA AGAAAGTATC CAAAAGGATA TATTTAGTTA TATAAGAAAA
GAGCAGCAAA AAATGTTGAG CTTATATAAA AAACAATCTT GA
|
|---|
| Protein sequence | MPERKPVVEG YQKAVEKLSG VDINAIVFLL FIILIIILAV LFLNSLSKKL KAKYHYSEFV
KYAKEKELSD EQVSILWDYS KKMGRDPFLA LEFKSPFEKV VDLYIKDNPN FNENLIKDMR
EKLGFDVVPS FVPITVTKDI DLFQGGRIKL EDGRSFNVVL YDKDELYMYW AITDKNVPNL
NVGDKVKISF IRKSDGAYVV EGQIEDILKE SGNVILKFPH TFEILRIQRR EYPRIDTDIE
AVLGKKIKED DKEIIKWHIG RILDISPSGA RFCVSVEEKN TLNLRIGDEI ILTFTLEEKD
FQLTGDVVNV YEKQKIICYG IKFKEIKESI QKDIFSYIRK EQQKMLSLYK KQS
|
|---|
| |