| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0160 |
|---|
| Symbol | |
|---|
| ID | 6331358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 176420 |
|---|
| End bp | 177829 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642656438 |
|---|
| Product | Cytochrome-c oxidase |
|---|
| Protein accession | YP_001930359 |
|---|
| Protein GI | 188996108 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
|---|
| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000291427 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTACCG CAACAGCAAC AGGTGATGTT CAATTAACAA ACCTCGTTAA CTATACCCTT
GTAAAGCTTC ACGTTGCAAT GGGTCTGATT TTCTTCATTA TTGTTGGATT AATGGGATTC
TTATACTCTT TACAGCTTGA TGGTATCTAT CCATTCCCAG GGATAGAATT TTTATCCGCC
GGTAGGGTGA GAATGATTCA CACAGCAGGT GCTGCTTATG GATTTTTAGT AAACATGTTT
ACTGGTCTTC TTTATTGGGC AGTTCCAAGA TTTACAGGTT ATAAAGTTTT TAACGAAAAA
TACTTAGGTG GTTTTATGTT TATTGGTCTT CAGGCGGCTG TATTAATTAC AGTTGTTGCT
ATTCTTTTCT TAGGTCAAGC TGACAACGTT GAATGGGGTG AGACACCTTG GTGGATTGAC
CCTATAATTG TTGCTTGGTT ATTGTTACAT GCAATTCAAT TTGGTACTCC AATTTTAAAA
GCATCTCAAA AGGCTCCTCT TTATGTTACA GGATGGTATG TATCAGCAAT GTTGGTATGG
ACACCCCTTG TTGTGTTCAT GGGTAACTTT ATACCAAGAT TCTGGTCTGC AGGTTCTGGA
GCTGGTGCAG TTCAATCTAC ATTCATTCAC GACTTAGTTG GGTTGTACGT TACACCTGTA
GCTTGGGGAT TGATGTATTA CTTTGTACCA GTTATTATGA AAAAGCCAAT GTGGTCTCAT
GGGTTGTCAT TACTTGGTTT CTGGGGATTG GCATTTTTCT ATCCAATGAA CGGTGTTCAC
CACTTCATGT GGTCTCCAAT TCCAATGTTT GCTCAGTATT CAGCAGTATT TGCAACAGTT
GCTATTGAGT TTGCAGTTAC ATCGGTTTTA ATCAACTTCA TGATGACATT AAGAGGTTCT
GCTGAAGTAT TAAAGTACAA TGTACCTTTA AGATATATGT ATACTGGAGC AATTTTCTAC
TGGATTACTT GCTTCCAATG TGCATTTCAC GTTACATTAA CATTCCAAAA AGTTATCCAC
TTTACAGACT GGGTAACAGG ACACGCACAC CTAATAATGT TTGGTACATT TGGAATGTGG
GTTCTTGGAA TGGCTGAATA TGTATGGCCA AGGCTCTTTG GAAAAGAAAC TATGTATTCT
AAGGGAATGT CAGAAGGAGC ATACTGGTTA TTAACAATTG GTGTAATTGC AATGTTTGTT
GACTTAACAG CTGTAGGGTT AGTTCAAGGT TTTGACTGGA TTGGATTAAA CCCATGGATT
GACTCAGTTA ATTTCTCAAA ACCATTCTGG TACTTCAGAT CTGTTGCTGG AATCATGATG
TTAACAGGAT TATTAATGTA TGCTATGAAC TTCTATAAAA CTGCTACAGC TGGTAAAGGT
CTTGAAGCTC AGCTAAAGCA AACAGTATAA
|
|---|
| Protein sequence | MATATATGDV QLTNLVNYTL VKLHVAMGLI FFIIVGLMGF LYSLQLDGIY PFPGIEFLSA
GRVRMIHTAG AAYGFLVNMF TGLLYWAVPR FTGYKVFNEK YLGGFMFIGL QAAVLITVVA
ILFLGQADNV EWGETPWWID PIIVAWLLLH AIQFGTPILK ASQKAPLYVT GWYVSAMLVW
TPLVVFMGNF IPRFWSAGSG AGAVQSTFIH DLVGLYVTPV AWGLMYYFVP VIMKKPMWSH
GLSLLGFWGL AFFYPMNGVH HFMWSPIPMF AQYSAVFATV AIEFAVTSVL INFMMTLRGS
AEVLKYNVPL RYMYTGAIFY WITCFQCAFH VTLTFQKVIH FTDWVTGHAH LIMFGTFGMW
VLGMAEYVWP RLFGKETMYS KGMSEGAYWL LTIGVIAMFV DLTAVGLVQG FDWIGLNPWI
DSVNFSKPFW YFRSVAGIMM LTGLLMYAMN FYKTATAGKG LEAQLKQTV
|
|---|
| |