Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0155 |
Symbol | |
ID | 6331353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 172479 |
End bp | 173309 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642656433 |
Product | spermidine synthase |
Protein accession | YP_001930354 |
Protein GI | 188996103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0421] Spermidine synthase |
TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.164944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCTGGT TTACTGAGTA TCAAACACCA AACACAGGAT TAACTGTAAA AGTTAAAGAA GCTAAAACAG TGAAATCAAA GTATCAGGAA ATCTTGATCT TAGATACTTA TGAGTATGGC AAAATGCTTG TTTTAGATGG TGCAGTTCAA ACAACAGAAA GAGATGAGTT TATATATCAT GAGATGCTTA CTCATCCTGC CTTGATAAAA CATCCAAACC CAGAAAGAGT TCTTGTTATT GGCGGTGGTG ATGGTGGAAC AATTAGAGAA GTTTTAAAGC ATCCATCTGT AAAAGAAGCT CATTTATGTG AAATTGATGA AGAAGTTATA AAAATTTCAA AAGAGTATCT TCCTACAATT TCATGTGAAC TAAACAATCC AAAAGTCCAA GTTTTTGTAG AAGATGGAAA TAAGTTTTTA GATGAAAGAA AAAATTATTA TGATGTTATA CTGCTTGACC TATCTGACCC AGTAGGTCCT GCAGAAGCTT TGTTTAAAAG AGAATTTTAT ACTAAGGTTA AAAATGCACT TAGAGAAAAT GGAATAATGG CAGCACAAAC TGAATCTCCA TTTTTACAAG AGCTTTATTT TAAGACAGCT GTAAATGAGA TTAAACAAGT ATTTAAATAT TTTGGAACTT ATTTAGCATT TATTCCAACG TATCCAGCTG GAATGTGGAG TTTTACATTG GCTTCCGATG ATGTTGATAT TTTAAAGTAT GAAGAAAGCG AGTTTGAAAA GATTAAGGAT TTGAAAACAA AATATTTTTG TGATAAAATA TATGCTTCTT TATTTTCAAT ACCAAAATTT GTATCAGATT TAATTAAATA A
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Protein sequence | MIWFTEYQTP NTGLTVKVKE AKTVKSKYQE ILILDTYEYG KMLVLDGAVQ TTERDEFIYH EMLTHPALIK HPNPERVLVI GGGDGGTIRE VLKHPSVKEA HLCEIDEEVI KISKEYLPTI SCELNNPKVQ VFVEDGNKFL DERKNYYDVI LLDLSDPVGP AEALFKREFY TKVKNALREN GIMAAQTESP FLQELYFKTA VNEIKQVFKY FGTYLAFIPT YPAGMWSFTL ASDDVDILKY EESEFEKIKD LKTKYFCDKI YASLFSIPKF VSDLIK
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