| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0146 |
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| Symbol | alaS |
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| ID | 6331344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 162658 |
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| End bp | 165288 |
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| Gene Length | 2631 bp |
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| Protein Length | 876 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656424 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001930345 |
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| Protein GI | 188996094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0010822 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTATA TGACAGCTGA TGAAATAAGG CAGAGCTTTT TAAAGTATTT TGAAAGTAAA
GGACATACAA TCGTAAAATC TGCATCAATC ATTCCTGAAA ATGACCCAAC CCTATTATTT
GTTAACGCCG GGATGGTTCC ATTTAAAAAT GTATTCCTTG GACTTGAAGA AAGACCCTAT
AAAAGAGCCG CATCTTGTCA GAAAGTTTTT AGAGTATCCG GAAAACATAA CGACCTTGAA
AATGTAGGAT ACACACCAAG ACACCATACA TTTTTTGAGA TGCTTGGAAA CTTCTCATTT
GGTGATTACT TTAAAAAAGA AGCCATTGAG TTTGCTTGGG AGTATTTAAC AGAGCATTTA
GAAATTCCAA AAGAAAAACT TCTTGTATCT GTATTTGAAG AGGACGACGA AGCATTTGAA
ATTTGGAATA AACACATAGG ACTTGATGAA AGCAAGATAA AAAGAATGGG CTATAAAGAT
AACTTCTGGT CAATGGGTGA TACCGGACCG TGCGGACCAA GTTCAGAGAT TTACTACGAT
AGGGGCGAAA AATTCGGAAA TCCGGAGTTT GGAGCAGAAG ATGATTTTAG ATATTTAGAG
ATATGGAACC TTGTTTTTAT GCAATACAAC AGAGATGAAA AAGGCGTATT ACATCCACTT
CCAAATCCAA GCATTGATAC AGGCATGGGA CTTGAAAGAA TAGCATCAGT CTTACAAGGA
GTGGATAGCA ACTACGATAC AGACCTATTC AAGCCAATCA TCCAATTTGC AGAAGAAGTA
TCAGGAAAAG AGTACGGAAA GAATGAAAAA GATGATATAG CAATGAGAGT TATAGCCGAC
CATTTGAGAG CCATCACATT CTTAATTTCT GATGGAGTTT TACCGGCAAA CGAAGGGAGA
GGCTATGTTT TGAGAAGAAT AATAAGAAGA GCTTTAAGAT ACGGAAAAAA TCTTGGCATA
GAAAAGCCGT TTTTGTATGA AGGGGTTGAT GTTGTAATTG AAAAAATGAA AACTGCATAT
CCGGAGCTTA TACAAAACAG AAGCTTTATA AAAACAATCA CAAAATCAGA AGAAGAAAAG
TTTATAAAAA CTCTAAAAAG GTCAATGGAT ATTCTCTATC AAATGATAGA ACAGGCAAGA
AAAGAAAACA GAAGACACTT AACAGGTGAA GAAACATTCA AGCTTTATGA TACATACGGA
TTTCCAATAG ACCTAATGGA AGAAATATTA AAAGATGAAG GATTCACTTT TGATTTAATA
GAATTTCATA ATCTGTTAGA AGAGCAAAAA GAAAGAGCAA GAAAAAGCTG GAAATCTCAA
AGCAAAGAGA TTAAGCCGGT ATATTTAACA CTTAAAAACA AACTTCCGGA AAACCAATTT
GTTGGATACG AGACGCTAAC ATCTGAAAAC TCAAAAGTAT TGGCTATCAT AAAAGGAGAC
CAGCTTGTAG ACACTGCAAA AGAAGGAGAA GATATTGAGA TAGTGCTTGA CATCACGCCT
TTCTATCCGG AAAAGGGCGG ACAAATTGGA GATAGGGGAA TCATAGAAGG TGATGAGTTT
TTATTTGAAG TATTAGACAC ACAAACGCCG GTAGATGGCT TGATTGTTCA TAAAGGAAAG
GTTTTATTTG GAAGTGTAAA AGAGGGAGCA TATGTAAGGG CTAAGACTGA TAAAGAAAGA
AGAGAAAACA TAATGAGACA TCACACAGCA ACACACCTTT TACACGCAGC TTTAAGAAAC
GTTCTGGGAG ACCACGTAAA ACAGGCTGGT TCTTTGGTAT CAGATGAATA TCTAAGATTT
GACTTTACAC ACTTTGAAAG CATGACAGAC GAAGAGCTAA AAGCCGTTGA AGAGCTTGTA
AATAGAGAAA TAATGAAAAA TGAAGAAGTT GTATGCCAAG AGATGCAATA CGAAGAAGCT
TTAAAATCCG GGGCAATGGC TATTTTTGAA GAAAAATATG CAGACGTTGT AAGAGTAATA
TCTGCCGGTA TTTCTAAGGA GTTATGCGGT GGGACTCATG TAAAAAGAAC AGGAGATATT
GGATACTTTA AAATCCTTTC AGAATCTGCA GTATCATCCG GAACAAGAAG AATAGAGGCA
GTAGCAGGAA TTAAGGCAGT AGAAAAAGGC TTGCAAGAGC ATTACATAAT AAAAGATTTA
TCAAGACTTT TAACAGCAAA AGAAGACCAA CTTTTAGACC GAGTATTAAA GCTGCAAAAT
CAGATAAAAG AGAAAGAAAG AGAGATAGAA AACTTAAGAA AAAAACTTGC TTTATCAAAT
ATTAATGAAA ATCTAAACAT CATTGAAAAA GAAGGATTTA AAGTTGCTTA TGTATCAGTT
GAAAATCTAA ATCCAAATGA GCTGAGAGAA ATCGCAGACC ATTTAAGACA AAAGCTTGGA
AAATCTGTAA TTTTGGTTGC ATCAAAAGAT GCTGAAAAAC AAAAAGTTAA CTTTGTTGTA
GCAGTATCAA AAGAGTTATC AGAAAACTAT AAAGCCGGCG ATATTGTTAA AAAAGTTGCT
TCTGCCGCTA ATGGAAGTGG CGGCGGAAGA CCAGACTTTG CACAAGGTGG AATAAATGAC
ACATCTAAAT TAAGTCAGCT TTTTGAAGAA TTTAAAAAAA TTTTTAGCTA A
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| Protein sequence | MKYMTADEIR QSFLKYFESK GHTIVKSASI IPENDPTLLF VNAGMVPFKN VFLGLEERPY
KRAASCQKVF RVSGKHNDLE NVGYTPRHHT FFEMLGNFSF GDYFKKEAIE FAWEYLTEHL
EIPKEKLLVS VFEEDDEAFE IWNKHIGLDE SKIKRMGYKD NFWSMGDTGP CGPSSEIYYD
RGEKFGNPEF GAEDDFRYLE IWNLVFMQYN RDEKGVLHPL PNPSIDTGMG LERIASVLQG
VDSNYDTDLF KPIIQFAEEV SGKEYGKNEK DDIAMRVIAD HLRAITFLIS DGVLPANEGR
GYVLRRIIRR ALRYGKNLGI EKPFLYEGVD VVIEKMKTAY PELIQNRSFI KTITKSEEEK
FIKTLKRSMD ILYQMIEQAR KENRRHLTGE ETFKLYDTYG FPIDLMEEIL KDEGFTFDLI
EFHNLLEEQK ERARKSWKSQ SKEIKPVYLT LKNKLPENQF VGYETLTSEN SKVLAIIKGD
QLVDTAKEGE DIEIVLDITP FYPEKGGQIG DRGIIEGDEF LFEVLDTQTP VDGLIVHKGK
VLFGSVKEGA YVRAKTDKER RENIMRHHTA THLLHAALRN VLGDHVKQAG SLVSDEYLRF
DFTHFESMTD EELKAVEELV NREIMKNEEV VCQEMQYEEA LKSGAMAIFE EKYADVVRVI
SAGISKELCG GTHVKRTGDI GYFKILSESA VSSGTRRIEA VAGIKAVEKG LQEHYIIKDL
SRLLTAKEDQ LLDRVLKLQN QIKEKEREIE NLRKKLALSN INENLNIIEK EGFKVAYVSV
ENLNPNELRE IADHLRQKLG KSVILVASKD AEKQKVNFVV AVSKELSENY KAGDIVKKVA
SAANGSGGGR PDFAQGGIND TSKLSQLFEE FKKIFS
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