Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0145 |
Symbol | |
ID | 6331343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 160159 |
End bp | 162597 |
Gene Length | 2439 bp |
Protein Length | 812 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642656423 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001930344 |
Protein GI | 188996093 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | [TIGR00517] acyl carrier protein [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00701888 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAATA TAAAGCCCTT AGAAAAGACC GCCTTAATAC ACAAAGGTCA AGAGATAAGC TACATATCAT TATTAGAAAA TATAAAAAAA TATTCAAATA TTTTAGATAT AAAGCCGGAA GATAAAGTAG CTATTTTTAG CGAAAATAGA CCGGAATGGA TCTATGCCTT TTTTGCAGTT TGGGAAAAAT GCGGAGTAAA CGTCCCGATA GATTTTATGT CTTCAGAAGA TGAACTTTTT TACATACTAA ACGACAGTAA GCCAGTATAC ATTTTTACAT CTAAAAATAA TAAAGAAAAA GTTTTAAATG TGAAGCTAAA GCTTGATTAT GATATAAAAG TTTTGGTTTT TGAAGAGATT GAATTTACCA GTCCAATTTT TGAGAATAAA GAATGTAAGA AGCTTGAAGA AGATGTAGCT GTAATACTTT ACACTTCCGG AACTACAGGA CAGCCAAAAG GTGTAATGCT TAGTTATAAA AATCTACTAT CTAACATAAA AAGCATAGAA AAAGTAGAGA TTGCAAACTC TCAAGACTCA ACCCTTGCGA TACTACCATT TCATCATTCT TATCCTTTGA TGGTTTCTAT GCTCACACCT CTTCATATTG GTGCTACGAT TGTTTTTCTT GATGAGTTGT CTCCACAGGA TATTTTAGAT AAGCTAAAAA AATACAAGAT TACTATTCTT ATAGGCGTTC CCAGGCTGTA TGCTCTTTTT CATAGAAGGA TTTTTGATAA AATCAACGAA GATTTTTTTA TAAAAACAGT TTTTAAACTT TGTAAAAAAA TTAACAACCA AACACTTAGT AAAACAGTTT TTAAAAAAGT GCATGATGTA TTTGGTGGAA ATATAAAATA CTTTGTTTCT GGTGGTGCAA AGCTTGATTT AGATATTGCA AAAGATCTTC AGGCTCTTGG ATTTAAGATT ATTGAAGGAT ATGGACTAAC AGAGACCTCT CCTATCGTAT CATTCAATCC ACCATACAAA ATTAAACTTG GCTCGGTAGG AAAGCCAATA GAAGGTGTAC AAGTAAAGAT AGAAGATGAT GAAATTCTTG TTAAAGGTGA TAATGTTTTT GTTGGATATT TAAATAAGAT TGAAGAAACG AAGAAAGCAT TTAAAAATGG CTATTTTATG ACAGGAGACC TTGGGTATCT TGATGAAGAT GGCTATCTTT ATATAACAGG AAGAAAAAAA GAAATCATAG TCTTACCAAA TGGGAAAAAC ATCAACCCGG AAGAAATAGA GAACATAATT CTTAAAAATT TTGATATTGT AAAAGAGATA GCAGTAATTC AAAAAGACAA TCAGCTTTTT GCTATTATTT ATCCAGATTT TGAAGTTGTA AAGAAAAGAA ACATTGTAAA TCTTGAAGAG ACAATAAAAT GGAATGTGAT TGATAAATAC AATCAAACTG TAGCAAGCTA TAAAAAAATT GGCGGTTTTA AGATTGTAAA TACCGAACTT CCAAAAACAA GGCTTGGAAA AATCAGAAGA TTTATGCTTA ATCAATTTCT TGAAAAACAA GAAAGATCAG TAGTCAAAGA AGAACCAAAA ACTCAAACTT ACAGCATATT AAAAGAATAC TTAGAAAAAT ATACGAATCT AAGCGTATAT CCGGACTCTC ACATAGAGAT AGACCTTGGG CTTGATTCTC TTGGGAAAAT AGAGTTTTTG ACCTTCATAG AAAGCACATT TGGAATAAAA CTTGATGAAA AGGATTTAAT AGAAAATCCA ACCGTTGAAA AATTATCATA CTTTATAGAT GAAAAGAAAC AAAAGATAGA AATCTCAGAA ATAGATTGGA AGAAGATTTT AAACCAGCCA ATAAGCTTTG AATTGAAAGA AGGATATTTG ACAATCATAA AACCGATTTT AAAGCTATAT TTTAAGCTTT ACAACAACTT AGAAATAAAA GGCATAGAAA ATATTCTAAA TCAGCCAGTT ATATTTGCTC CAAACCATCA AAGCTATCTT GATGGATTTT TGATCGTTGC ATCCCTTCCA AATCAAATAC TTAAAAAAAC ATACTTCTTA GCAGAAGAGA CTTATTTTAA TACGTCGTTT AGAAGGTGGA TTGCGAGAAA TTTTAATATC ATAACTGTAA ACGTTAACAA AGATTTAAAA GAGTCATTGA TTAAATCAGC TTATGCTCTT AAAAATGGAA AAAACGTTGT TATCTTTCCG GAAGGTGCAA GAACAAGGGA TGGTAAATTG CTGCCGTTTA AAAAAGGTTT TGCTATTTTA TCAAAAGAGT TAAACATTCC GGCTGTTCCA GTAGTAATAA AAGGTGTCTT TGAAAGTCTT CCTATAAATA AATCTCTTCC AAGCCCTTTC AAAATATCAG TAGAATTTTT AAATCCTGTG TATCCAGAAA ATAAAAGCTA CGATGAGATA GTAAAAATCG TTTATAATGA GATTTCAAAG AAGTTGTAA
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Protein sequence | MINIKPLEKT ALIHKGQEIS YISLLENIKK YSNILDIKPE DKVAIFSENR PEWIYAFFAV WEKCGVNVPI DFMSSEDELF YILNDSKPVY IFTSKNNKEK VLNVKLKLDY DIKVLVFEEI EFTSPIFENK ECKKLEEDVA VILYTSGTTG QPKGVMLSYK NLLSNIKSIE KVEIANSQDS TLAILPFHHS YPLMVSMLTP LHIGATIVFL DELSPQDILD KLKKYKITIL IGVPRLYALF HRRIFDKINE DFFIKTVFKL CKKINNQTLS KTVFKKVHDV FGGNIKYFVS GGAKLDLDIA KDLQALGFKI IEGYGLTETS PIVSFNPPYK IKLGSVGKPI EGVQVKIEDD EILVKGDNVF VGYLNKIEET KKAFKNGYFM TGDLGYLDED GYLYITGRKK EIIVLPNGKN INPEEIENII LKNFDIVKEI AVIQKDNQLF AIIYPDFEVV KKRNIVNLEE TIKWNVIDKY NQTVASYKKI GGFKIVNTEL PKTRLGKIRR FMLNQFLEKQ ERSVVKEEPK TQTYSILKEY LEKYTNLSVY PDSHIEIDLG LDSLGKIEFL TFIESTFGIK LDEKDLIENP TVEKLSYFID EKKQKIEISE IDWKKILNQP ISFELKEGYL TIIKPILKLY FKLYNNLEIK GIENILNQPV IFAPNHQSYL DGFLIVASLP NQILKKTYFL AEETYFNTSF RRWIARNFNI ITVNVNKDLK ESLIKSAYAL KNGKNVVIFP EGARTRDGKL LPFKKGFAIL SKELNIPAVP VVIKGVFESL PINKSLPSPF KISVEFLNPV YPENKSYDEI VKIVYNEISK KL
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