Gene SYO3AOP1_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0145 
Symbol 
ID6331343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp160159 
End bp162597 
Gene Length2439 bp 
Protein Length812 aa 
Translation table11 
GC content30% 
IMG OID642656423 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_001930344 
Protein GI188996093 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase
[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID[TIGR00517] acyl carrier protein
[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00701888 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA TAAAGCCCTT AGAAAAGACC GCCTTAATAC ACAAAGGTCA AGAGATAAGC 
TACATATCAT TATTAGAAAA TATAAAAAAA TATTCAAATA TTTTAGATAT AAAGCCGGAA
GATAAAGTAG CTATTTTTAG CGAAAATAGA CCGGAATGGA TCTATGCCTT TTTTGCAGTT
TGGGAAAAAT GCGGAGTAAA CGTCCCGATA GATTTTATGT CTTCAGAAGA TGAACTTTTT
TACATACTAA ACGACAGTAA GCCAGTATAC ATTTTTACAT CTAAAAATAA TAAAGAAAAA
GTTTTAAATG TGAAGCTAAA GCTTGATTAT GATATAAAAG TTTTGGTTTT TGAAGAGATT
GAATTTACCA GTCCAATTTT TGAGAATAAA GAATGTAAGA AGCTTGAAGA AGATGTAGCT
GTAATACTTT ACACTTCCGG AACTACAGGA CAGCCAAAAG GTGTAATGCT TAGTTATAAA
AATCTACTAT CTAACATAAA AAGCATAGAA AAAGTAGAGA TTGCAAACTC TCAAGACTCA
ACCCTTGCGA TACTACCATT TCATCATTCT TATCCTTTGA TGGTTTCTAT GCTCACACCT
CTTCATATTG GTGCTACGAT TGTTTTTCTT GATGAGTTGT CTCCACAGGA TATTTTAGAT
AAGCTAAAAA AATACAAGAT TACTATTCTT ATAGGCGTTC CCAGGCTGTA TGCTCTTTTT
CATAGAAGGA TTTTTGATAA AATCAACGAA GATTTTTTTA TAAAAACAGT TTTTAAACTT
TGTAAAAAAA TTAACAACCA AACACTTAGT AAAACAGTTT TTAAAAAAGT GCATGATGTA
TTTGGTGGAA ATATAAAATA CTTTGTTTCT GGTGGTGCAA AGCTTGATTT AGATATTGCA
AAAGATCTTC AGGCTCTTGG ATTTAAGATT ATTGAAGGAT ATGGACTAAC AGAGACCTCT
CCTATCGTAT CATTCAATCC ACCATACAAA ATTAAACTTG GCTCGGTAGG AAAGCCAATA
GAAGGTGTAC AAGTAAAGAT AGAAGATGAT GAAATTCTTG TTAAAGGTGA TAATGTTTTT
GTTGGATATT TAAATAAGAT TGAAGAAACG AAGAAAGCAT TTAAAAATGG CTATTTTATG
ACAGGAGACC TTGGGTATCT TGATGAAGAT GGCTATCTTT ATATAACAGG AAGAAAAAAA
GAAATCATAG TCTTACCAAA TGGGAAAAAC ATCAACCCGG AAGAAATAGA GAACATAATT
CTTAAAAATT TTGATATTGT AAAAGAGATA GCAGTAATTC AAAAAGACAA TCAGCTTTTT
GCTATTATTT ATCCAGATTT TGAAGTTGTA AAGAAAAGAA ACATTGTAAA TCTTGAAGAG
ACAATAAAAT GGAATGTGAT TGATAAATAC AATCAAACTG TAGCAAGCTA TAAAAAAATT
GGCGGTTTTA AGATTGTAAA TACCGAACTT CCAAAAACAA GGCTTGGAAA AATCAGAAGA
TTTATGCTTA ATCAATTTCT TGAAAAACAA GAAAGATCAG TAGTCAAAGA AGAACCAAAA
ACTCAAACTT ACAGCATATT AAAAGAATAC TTAGAAAAAT ATACGAATCT AAGCGTATAT
CCGGACTCTC ACATAGAGAT AGACCTTGGG CTTGATTCTC TTGGGAAAAT AGAGTTTTTG
ACCTTCATAG AAAGCACATT TGGAATAAAA CTTGATGAAA AGGATTTAAT AGAAAATCCA
ACCGTTGAAA AATTATCATA CTTTATAGAT GAAAAGAAAC AAAAGATAGA AATCTCAGAA
ATAGATTGGA AGAAGATTTT AAACCAGCCA ATAAGCTTTG AATTGAAAGA AGGATATTTG
ACAATCATAA AACCGATTTT AAAGCTATAT TTTAAGCTTT ACAACAACTT AGAAATAAAA
GGCATAGAAA ATATTCTAAA TCAGCCAGTT ATATTTGCTC CAAACCATCA AAGCTATCTT
GATGGATTTT TGATCGTTGC ATCCCTTCCA AATCAAATAC TTAAAAAAAC ATACTTCTTA
GCAGAAGAGA CTTATTTTAA TACGTCGTTT AGAAGGTGGA TTGCGAGAAA TTTTAATATC
ATAACTGTAA ACGTTAACAA AGATTTAAAA GAGTCATTGA TTAAATCAGC TTATGCTCTT
AAAAATGGAA AAAACGTTGT TATCTTTCCG GAAGGTGCAA GAACAAGGGA TGGTAAATTG
CTGCCGTTTA AAAAAGGTTT TGCTATTTTA TCAAAAGAGT TAAACATTCC GGCTGTTCCA
GTAGTAATAA AAGGTGTCTT TGAAAGTCTT CCTATAAATA AATCTCTTCC AAGCCCTTTC
AAAATATCAG TAGAATTTTT AAATCCTGTG TATCCAGAAA ATAAAAGCTA CGATGAGATA
GTAAAAATCG TTTATAATGA GATTTCAAAG AAGTTGTAA
 
Protein sequence
MINIKPLEKT ALIHKGQEIS YISLLENIKK YSNILDIKPE DKVAIFSENR PEWIYAFFAV 
WEKCGVNVPI DFMSSEDELF YILNDSKPVY IFTSKNNKEK VLNVKLKLDY DIKVLVFEEI
EFTSPIFENK ECKKLEEDVA VILYTSGTTG QPKGVMLSYK NLLSNIKSIE KVEIANSQDS
TLAILPFHHS YPLMVSMLTP LHIGATIVFL DELSPQDILD KLKKYKITIL IGVPRLYALF
HRRIFDKINE DFFIKTVFKL CKKINNQTLS KTVFKKVHDV FGGNIKYFVS GGAKLDLDIA
KDLQALGFKI IEGYGLTETS PIVSFNPPYK IKLGSVGKPI EGVQVKIEDD EILVKGDNVF
VGYLNKIEET KKAFKNGYFM TGDLGYLDED GYLYITGRKK EIIVLPNGKN INPEEIENII
LKNFDIVKEI AVIQKDNQLF AIIYPDFEVV KKRNIVNLEE TIKWNVIDKY NQTVASYKKI
GGFKIVNTEL PKTRLGKIRR FMLNQFLEKQ ERSVVKEEPK TQTYSILKEY LEKYTNLSVY
PDSHIEIDLG LDSLGKIEFL TFIESTFGIK LDEKDLIENP TVEKLSYFID EKKQKIEISE
IDWKKILNQP ISFELKEGYL TIIKPILKLY FKLYNNLEIK GIENILNQPV IFAPNHQSYL
DGFLIVASLP NQILKKTYFL AEETYFNTSF RRWIARNFNI ITVNVNKDLK ESLIKSAYAL
KNGKNVVIFP EGARTRDGKL LPFKKGFAIL SKELNIPAVP VVIKGVFESL PINKSLPSPF
KISVEFLNPV YPENKSYDEI VKIVYNEISK KL