| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0140 |
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| Symbol | |
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| ID | 6331338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 154775 |
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| End bp | 155941 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642656419 |
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| Product | lipid-A-disaccharide synthase |
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| Protein accession | YP_001930340 |
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| Protein GI | 188996089 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0763] Lipid A disaccharide synthetase |
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| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00370869 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAAA TTTTCCTGAG CGTTGGCGAA ATTTCAGGAG ACAATTACGC TTCTGAGCTT
GCAAAACATT TAAAAGAATA TCAGATTACA GGAATAACAG GTCCAAAAAT GAGGGCAATC
GGTGTAAAGC CGGTTGCCAA CCTTGAAGAT ATATCCGTTG TAGGTCTAAC AGAGGCATTA
AGTAAATACA AAAAAATCAA AGAAGTATTC AAACAATCAG TCCAAGCTTT AAAATCCGGC
GTTGACCTTT TAATCGTTGT AGATTTTCCA GGGTTTAACA TAAAACTTTT AAAAGAAGCA
AAAAAGCTTG GAATAAAGAC TGTGTACTTT ATCTCTCCAC AGGTTTGGGC TTGGGGAAGT
GGCAGAGTTA AAGAAATAGT AGAAAATACA GATTTATTAA TATCTATCCT ACCTTTTGAA
GAAGAAATTT ATAAACCATA CGTATCAGAT AAATTCAAAT TTGCCTATGT AGGACATCCA
CTTTTAGATA TAATCAAAAT CTATGAAAAT GAAGATAGCT TTAAGCAGAA ATTAAACATT
CCAAAGAATA AGAGAATCAT AGGACTTCTT GCAGGCAGTA GAGAAAGCGA AGTAAATGTA
ATCCTTCCAA TATTAATAGA AGCCGCAAGA CTGCTAACAA AAACATTTGA TGATCTGCAT
TTTGTAATTC CAGCTACTGT CAACATGGTT GATAGGGTGT TAGAAAAAGT TAACTTTAGC
CTTCCTATAA CCGTGATCAC ATCCAACCTA TCAGATAAAA ACCTTCCTAA GTTTGAAAAC
CCTTCATATG AAGTAATGAA AAATGCAGTT TTTTCGATAA TCACGTCAGG AACGGCAACC
TTAGAAGCTG CTATTATTGG AAATCCATTT ATCATTGTTT ATAAGGTAAG TCCGATTACT
TACTTTATTG GTAAAAAACT TGTAAAGATA AATTATTTAG GACTTCCTAA CATAATAGCC
GGTAATGAAA TTGTACCGGA GCTTTTACAG GATAGATGCA ACCCTCTTGA TATTGCTAAT
AAGACTCTTG AATTTTTGAC AGATAAAAAT CTGTATAAAA CCCAAAAGAG AAATTTAGAA
ATAGTTAGAA AATCTCTTGG AAAAAAAGGA GCTATAGAAA GAGCTTCAAA TCTTATTCGC
ACACTGCTTG AGAAAGGTCA AGCATAA
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| Protein sequence | MKKIFLSVGE ISGDNYASEL AKHLKEYQIT GITGPKMRAI GVKPVANLED ISVVGLTEAL
SKYKKIKEVF KQSVQALKSG VDLLIVVDFP GFNIKLLKEA KKLGIKTVYF ISPQVWAWGS
GRVKEIVENT DLLISILPFE EEIYKPYVSD KFKFAYVGHP LLDIIKIYEN EDSFKQKLNI
PKNKRIIGLL AGSRESEVNV ILPILIEAAR LLTKTFDDLH FVIPATVNMV DRVLEKVNFS
LPITVITSNL SDKNLPKFEN PSYEVMKNAV FSIITSGTAT LEAAIIGNPF IIVYKVSPIT
YFIGKKLVKI NYLGLPNIIA GNEIVPELLQ DRCNPLDIAN KTLEFLTDKN LYKTQKRNLE
IVRKSLGKKG AIERASNLIR TLLEKGQA
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