Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0135 |
Symbol | |
ID | 6331333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 149383 |
End bp | 150945 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642656414 |
Product | protein of unknown function DUF87 |
Protein accession | YP_001930335 |
Protein GI | 188996084 |
COG category | [R] General function prediction only |
COG ID | [COG0433] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0231678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC TTGGAATAGT TGTAGGTTCT ACAAAACCAA ACAGAGTTAA TTTCTTATCT AATAAACCAC TCAGACTTGG TCAGTTTGTG ATTTTAAAAT ACTTTGATGG CGATGAAGAA ATAAGGCTTC TTGGAATGAT TAATAAAGTT GAAAGAGAAA ATAAATATAT TCCGGAAGAT ATTCCAAATT ATGAAAAAAT TGACAGATTG ATAAAAGAAA GTTCAAGTGA GACAAAGGTT AAAGGAGAAA TTCAAATTCT TGGAAAAATT GCAGAAAGGG ATAACGGAAT AACTCTTGAA TTTCAAAGGA CGCCTCCTCT TCCAGCATCA GAAGTTTTAA AGCCACCAAA AGAAATATTA GAAAAACTCT TTGGCTCAAA AGGAAAAAAT TATATAAAAA TTGGAAAGCT TTTAAGTGAA GCAGAAGATG TAAATGTGTA TATTGATATT AATCAAATCG TTTTGAGACA TCTTGCAATC CTTGCAATCA CAGGAGCAGG AAAGTCTAAC ACAGTATCGG TACTACTTGA CAATATAGTT AATTTAAAAG GAACTGTTGT TGTGTTTGAT TTTCACGGAG AGTATACAAG AGCTGAATTT AGAAGAGATG GGAAAAATGT TGTAAATGTT ATAAAACCTC TCGTTGACCC AACTACCCTT GATAAAAAAG ATTTTGCAAA GCTAATAGGA ATTAGAGAAA ATGCAACTAC TCAGTATAGA TACTTTAAAT ATGCAGTTGA TAAAGTATTA AGAGATTTAA AAGATGAAAA AGGCGATGAT TGGAGAAGGT TTGTAGAGAC TGAAAGTTTT TTTGACAGAT TGATTGGTGA GCTTGAAAGT TGGACGGATG AAGAAAAATC ATCTCCATTT AAAGGTAAAA TCAGAGAAGA ATCTCTTTAT GAAGTTATAA ATAAAATTGA AGATACAATG GTAGATCTAA GCCATATAAT AAAAATTGGT GCAAAAGACC TTATAGAAAA TATAAGACCG GGTATGGTAA ATGTTTTTGA CTTTTCAGAA GTTGATGAAG AAGTAGCAGA TGCCCTTGCA TCTAACATTT TAAAACATTC TTTAATAGAA AGAAAAAAAG CAGTAAGAGG AAGTAATAGC AAAATCCCAA ACCCAATTTT AATCGTTGTT GAAGAAGCTC ACATTCTTGC AGGTGTTAAA TCTGACACAG ACTCTAAATA TTGGATGACA AGAATAGCAA GAGAAGGTAG AAAGTTTGGG CTTGGCTTAT GCGTTGTTAC ACAAAGACCA AAAGGTTTAG ATAAAGAAAT TTTATCTCAG ATGAACAATA TGATAATACT AAAACTTGTT GAACCAGAAG ACCAAAAACA TGTTCAAAGT GCAAGTGAAT CATTATCTTC TGAGCTTATG GAATACCTGC CATCTCTTAA CCCAGGAGAA GCTATAATTC TTGGAAATAT GACAAAAATT CCACTGTTAA TTAAGATTGA CAAAGCTAAA GGAAAAATAC AAGGTAATGA TATACCAGTT GTTGATAAAT GGCTCGGTTC TGAAGAAAAA GTAAGTAAAT TAGAAGATTT AAAGGACTTT TAA
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Protein sequence | MEKLGIVVGS TKPNRVNFLS NKPLRLGQFV ILKYFDGDEE IRLLGMINKV ERENKYIPED IPNYEKIDRL IKESSSETKV KGEIQILGKI AERDNGITLE FQRTPPLPAS EVLKPPKEIL EKLFGSKGKN YIKIGKLLSE AEDVNVYIDI NQIVLRHLAI LAITGAGKSN TVSVLLDNIV NLKGTVVVFD FHGEYTRAEF RRDGKNVVNV IKPLVDPTTL DKKDFAKLIG IRENATTQYR YFKYAVDKVL RDLKDEKGDD WRRFVETESF FDRLIGELES WTDEEKSSPF KGKIREESLY EVINKIEDTM VDLSHIIKIG AKDLIENIRP GMVNVFDFSE VDEEVADALA SNILKHSLIE RKKAVRGSNS KIPNPILIVV EEAHILAGVK SDTDSKYWMT RIAREGRKFG LGLCVVTQRP KGLDKEILSQ MNNMIILKLV EPEDQKHVQS ASESLSSELM EYLPSLNPGE AIILGNMTKI PLLIKIDKAK GKIQGNDIPV VDKWLGSEEK VSKLEDLKDF
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