| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0116 |
|---|
| Symbol | |
|---|
| ID | 6331313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 128667 |
|---|
| End bp | 131069 |
|---|
| Gene Length | 2403 bp |
|---|
| Protein Length | 800 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642656395 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_001930316 |
|---|
| Protein GI | 188996065 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000170632 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCCAT TTGAAGATAA ATTAGATTTA CTTGAACTAC CATCAACATA CCCACTTATT
CCCACAAGAG ATGTTATAGT TTTTCCTTAT ATGGTATTTC CACTTTTTAT AGGAAGACCA
TTTTCAATTA AGGCAGTAGA AGAAGCACTT GATAATAATC AAAGATACAT CTTTCTCTCT
CTTCAGAAAG ACAAAGAAAA AGAAATTCCG ACAAAAAAAG ACATTCATGA GATAGGTGTC
GTTGCCACAA TTATCAGAAT GATGAAACTT GAAGATAATC GTATTAAAAT CCTTGTCCAA
GGTGTTTCAA GAGGAAGAAT AAAAGAATTA AAAAAAGTAG ATGACTACTA TCAGGTGGGA
GTTGAAATCA TAGAAGACCC GGAAGTAGAA GAAACGTTAG AAGTTCAAGC GCTTAAACAT
TCACTAAAAG ATTTATTGGA CAAGGCTATT TCGCTTGGCA AGCAGATAGT ACCAGATTTA
GTTGAGATAA TAAAATCGGT AGAAGAGCCG GGAAGACTTG CCGATTTGGT TGCATCTATA
CTTGATATAA AAGCAGAAGA AGCCCAGCAG ATTTTAGAAA TCTTAGACCC TGTTGAAAGA
TTAAGAGTTG TTCATGATAA ATTCTTAAAA GAAGTAGGAA TATTAGAGCT TCAGCAAAAA
ATCAGAATAT CTGCAAGAGA AGCCATTGAA AAAGACCAAA GAGAATACTT TTTAAGACAG
CAAATAAAAG CAATTCAAGA AGAGCTTGGC GAAAGAGATG AAAAGCAGGA AGAAATAGAA
AACTACAAAA AGAAAATAGA AGAATCCGGA ATGCCGGACG AAATAAAGGA AGAAGCTTTA
AAACAGCTTA AAAGACTTGA AAAAATGCAT CCAGATTCAG CAGAAGCAGG TGTTATTAGA
ACTTATCTTG ATTGGCTTGT AGAACTTCCA TGGAATAAAA GAACAAAAGA CAGACTTGAC
CTTAAAATTG CTAAGAAAAT CCTTGATGAA GACCATTATG ACTTAGAGAA AATAAAAGAA
AGAATTTTAG AGTATTTAGC TGTATTAAAA CTTAAAAAAG AAAGCTCAAA GGATAAATCT
ATAAAAGGAC CTATATTATG CTTTGTTGGA CCGCCGGGTG TGGGTAAAAC TTCACTTGGA
AGGTCTATTG CAAAAGCATT AAATAGAAAA TTTGTTAGAA TATCTCTTGG TGGAGTAAGA
GACGAAGCAG AAATAAGAGG TCATAGAAGA ACGTATGTTG GAGCGATGCC CGGAAAAATC
ATTCAGGCAA TAAAACAAGC CAGAACAAAA AACCCGGTAA TAATGTTAGA CGAAGTAGAT
AAAATCGGCT TAGATTTTAG AGGAGACCCA ACGGCGGCAC TTTTGGAAGT CTTAGACCCG
GAGCAGAATA AAGAGTTTAT AGACCATTAC CTTGGCGTTC CTTTTGATTT GTCAGAAGTG
ATGTTTATTT GCACAGCAAA CAGATTAGAT ACCATTCCAA GACCTTTATT AGACAGAATG
GAGGTTATAA GACTTTCAGG TTATTCAGAA GAAGAAAAAT TGCATATTGC TAAAAAATAT
CTAATTCCTA AGCAATTAAA AGAAAACGGC TTAGATGAGA AAACAGTAGA ATTTTCAGAT
AAAGCAATCA CATTCTTAAT TAGAGGCTAT ACAAGAGAGG CAGGCGTTAG AAACCTTGAA
AGACAAATAG GTTCTATCAT TAGAAAAATA GCTAAAAAAA TAATAGAAAC TGGAAAGAAA
AGGAAATATA AAATTACTCC AAGCTTGATT AAAAAATTCT TAGGAGCACC AATTTACTCA
ACAGAGAAAG AAGAAAAAGA TGAAGTTGGC GTTGTCACAG GATTAGCTTG GACTGAAGTT
GGCGGAGAAA TTCTTAAAAT AGAAGTAACA AAGATGGACG GAAAAGGCAA TTTAGTTCTT
ACAGGTTCAC TTGGTGATGT GATGAAAGAA TCTGCAAGAA TTGCATTCTC TTATGTAAAA
TCTAAAGCTA AAGAGCTTGG AATTGACCCG GAAGAATTTG GTAAATACGA TTTACATATT
CACGTGCCTG CGGGAGCTAT TCCAAAAGAT GGACCATCGG CAGGTATAGC AATTACAACA
GGCATTGCAT CTGTATTTAC AAACAGACCT GTAAGGTCGG ATGTTGCAAT GACAGGAGAA
ATCACATTAA GAGGAAAAGT TTTACCTGTT GGTGGACTAA AAGAGAAGAT TCTGGCGGCA
AAAAGAGCCG GAATAAAAAC AGTAATTTTA CCGAAAGACA ACAAAGAAGA AGTCATGTCT
GACCTTCCAC CATATGTCAG AAAATCAATG AATTTAATTT TTGTAGACCA TATTGATGAA
GTTTTCAAAA TCGCATTAAG AGAGGAGAAA AAAGAAGTTG AAAATCAGGA AAGCGAAAGT
TAA
|
|---|
| Protein sequence | MGPFEDKLDL LELPSTYPLI PTRDVIVFPY MVFPLFIGRP FSIKAVEEAL DNNQRYIFLS
LQKDKEKEIP TKKDIHEIGV VATIIRMMKL EDNRIKILVQ GVSRGRIKEL KKVDDYYQVG
VEIIEDPEVE ETLEVQALKH SLKDLLDKAI SLGKQIVPDL VEIIKSVEEP GRLADLVASI
LDIKAEEAQQ ILEILDPVER LRVVHDKFLK EVGILELQQK IRISAREAIE KDQREYFLRQ
QIKAIQEELG ERDEKQEEIE NYKKKIEESG MPDEIKEEAL KQLKRLEKMH PDSAEAGVIR
TYLDWLVELP WNKRTKDRLD LKIAKKILDE DHYDLEKIKE RILEYLAVLK LKKESSKDKS
IKGPILCFVG PPGVGKTSLG RSIAKALNRK FVRISLGGVR DEAEIRGHRR TYVGAMPGKI
IQAIKQARTK NPVIMLDEVD KIGLDFRGDP TAALLEVLDP EQNKEFIDHY LGVPFDLSEV
MFICTANRLD TIPRPLLDRM EVIRLSGYSE EEKLHIAKKY LIPKQLKENG LDEKTVEFSD
KAITFLIRGY TREAGVRNLE RQIGSIIRKI AKKIIETGKK RKYKITPSLI KKFLGAPIYS
TEKEEKDEVG VVTGLAWTEV GGEILKIEVT KMDGKGNLVL TGSLGDVMKE SARIAFSYVK
SKAKELGIDP EEFGKYDLHI HVPAGAIPKD GPSAGIAITT GIASVFTNRP VRSDVAMTGE
ITLRGKVLPV GGLKEKILAA KRAGIKTVIL PKDNKEEVMS DLPPYVRKSM NLIFVDHIDE
VFKIALREEK KEVENQESES
|
|---|
| |