Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0113 |
Symbol | |
ID | 6331305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 126461 |
End bp | 127582 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 642656392 |
Product | cytochrome c-type biogenesis protein CcsB |
Protein accession | YP_001930313 |
Protein GI | 188996062 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000313165 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAATG TAGTTGTTTT TGAAAATAAG AATAAACCAT CGTATTTAGA AGCAGGTTTA TTTGTTGGTG TCATTTTAGC ATTATTAGGA TTATCTGTTT TCTTAGCTTT ATCGTCAGGA AAGGTTAGTA ACGTTCTTGT GTTTCAAATT GCCGGCTTTA TTTATGGTTT ATCAGCATTG ATGTATATTT TTCAGTTTTT CTTTAAAAAT GAAAATATCG GTAAGGTTGG TACATTACTT GCATTTGCCG GATGGTTAAC ACAAACAATA GGATTGTTTA TAAGAGGTTT AGAATCTTAT AATATGGGTA TTTTCCATCC ACCTTGGACA AACCTTTATG AATCTTTAAT GTTTTTCCCG TGGCTTGCAG TTGGACTGTA TTTATACATT GAGAGAGAAT ACAAAACAAG AACTATTGGA ACATTTTTCA TGCCGATCGT TGCATTTTTG GTTATCTGGG GTCATAAGTT TAATACTGAT ATAAATCCGT TGGTGCCTGC TTTAAGAAGC TATTGGCTCT ACCTTCATGT CCTTGCATCG TTTGTAGGTT ATGCAGGTTT TACAGTAGCA TTTGGTGCAT CTTTTGCTTA TCTACTTAAA GAAGCTCAAG TTAAAAACAA ACCGGTAAAT ACGTATCATT ATGTAGGATT TATTTTAAGC TTAATCTTAA CGGGGATTTT TGGATATCTT ACTTTAACCG GTGCTAAGGA TATTAAAACA ATGATTTTTG GAATTATCTT TATCATCACT CTTATAACTT TAATTTATTT TGCTGTATAT GTCCTAAAAC CCATAGCCAA TAAACTTCCA TCTGAAAATT TACTTTCAGA GATTGCTTTT AAAGCAGTTG CTATCTCTTT TCCTGTATGG ACTGCATCTA TAATGCTTGG CGGTGCATGG GCAAATGAGG CTTGGGGTAG TTATTGGAGC TGGGACCCTA AGGAAACTTG GGCTTTAATA GTTTGGTTAT TCTTTGCAGC ATACATACAC GGAAGAACTA TCGGAAAATG GAAAGGTGAG ACTTCTGCAT GGATAGTGGT AGCAGGCTTT ATAATGCTTT TAATCTGTTA TTTTGGAGTA AACTTATACT TCCCTGGCTT ACATAGTTAT GCTACAGAGT AA
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Protein sequence | MDNVVVFENK NKPSYLEAGL FVGVILALLG LSVFLALSSG KVSNVLVFQI AGFIYGLSAL MYIFQFFFKN ENIGKVGTLL AFAGWLTQTI GLFIRGLESY NMGIFHPPWT NLYESLMFFP WLAVGLYLYI EREYKTRTIG TFFMPIVAFL VIWGHKFNTD INPLVPALRS YWLYLHVLAS FVGYAGFTVA FGASFAYLLK EAQVKNKPVN TYHYVGFILS LILTGIFGYL TLTGAKDIKT MIFGIIFIIT LITLIYFAVY VLKPIANKLP SENLLSEIAF KAVAISFPVW TASIMLGGAW ANEAWGSYWS WDPKETWALI VWLFFAAYIH GRTIGKWKGE TSAWIVVAGF IMLLICYFGV NLYFPGLHSY ATE
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