| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0092 |
|---|
| Symbol | |
|---|
| ID | 6331283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 103775 |
|---|
| End bp | 105412 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642656371 |
|---|
| Product | transposase |
|---|
| Protein accession | YP_001930293 |
|---|
| Protein GI | 188996042 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01765] transposase, putative, N-terminal domain
[TIGR01766] transposase, IS605 OrfB family, central region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00157706 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTC TGCAATGCTT ACTTGAATTC CAAAATATGC AAGATAAAGA GATTGTATTA
GATTTAATGT GTAGATTTTC ATCTGCCATG AGATATGCAT ACCAAAGATT ATTAGAAGGC
GAAAAAAGAA AAGATTTAAA AAAGCAATTA TCAAGACTAT TTAACATAAA CACAAGATAC
TCAGATGATG CTATATTTTT AGCACAGTCA ATAATTACGT CATGCAAAGA AAGAGAACAA
AATCCAAAAA AGCTTATATT TGGTTCAAGG AAATCATTTG AACAACTAAA GAAAAACCAT
TTAACAGGAA AAAGAAGAAA GGAATTAAAA ACAAAATGGA AAGAAAGCAG GCAAGGAAAT
TTATACTCAA CAGGAGATAA GTCTAAACAA GGAAATCTGA ATTTAAGATT TCAGTGGATT
AATAATGAGT TATACTTGAG AATAAACACA GGAGATAGGC AATATATTTA CGCAAAAGTA
GTTAGAGACG TTAAAAGAGA AAAAGATAAA TGGATAGAGT TTATGTTTAT GCTTGAAAAT
GCATATAAAT ACGGAGAGTG GTTTCCATAC CCAGTCAGAC TAAAAGTAAA AAACGGTAAT
GTATACGCCT TTATATCCAT CGATGAAAAA CTACCACCTA TCACGATTAA AAGAGATAAT
GGAATAATAG GCATAGATGT AAACGCATAT CCATTTCATT TAGCATTAGC TTTTGCAAGT
AAAGATGGAA ATTTAGAGAA ATATCAAAGT ATTAGTTTAA ACGAATTATT AGAAGTAAAC
TCAGAAAAAA GACAGTATTT AGAATGGCAA ATAGCACATA AGATAATAGA GATAGCAAAG
GAAGAGAATA AAGCTATTAC TATTGAAAAC TTAAAGAAAC TACCAAAAGG CAAAAGAGGG
GACGGATTTG CCAAATTAAG AGGAAGACTA CAAAAATGGA GCTATAAAAG ATTATTAGAC
AAAATAGAAA TACTGGCAAA GAGAAACGGG ATAGAAATAA GAAAAGTTAA TCCTGCATAT
ACATCAGTAA TTGGAAAGCT AAAATATGCA CCACAATACA ACATAGACAA AGACATAGCA
GGAGCTTATG TAATAGCAAG AAGAGGATTA GGATATAAAG AGAAATTACC TAAAAATTAC
AAAGAACTAT TAAATGATGC TGACTTTCTA TCATACACTA TAGCAAAAAT TGAAGACGAT
ATTAAAAGAC TAAAAGAAGA TCTAAAAGAA GAGAAGAATG AGTATAAGAG AAATGGATTA
AAAAGTAAAT TAGCAAAACT CAGAAAGAGT TTAAAAACAT TGCAGAAATA TTTAGAAAGT
GGAAAGAGTG AGTCATCTTC CCGACAACCT GTCAACCGAC GGAAGGAACA GGTGAGGGGT
CTGCCTACAA GCAGACATAA AAGCTGGCAA GTTCTCTCCA TAGCCTTAGC CTTCTGCTGT
CTTGAAAAGT CTTACAGAGA TTTTTCTCCT TTGAAGCGTG TAATCGTTTC AAAGGATTGG
ACAGTAGTGG CTAATAGGTT AGCTCCTGTA CTTGGGACAG GGACTATGAC ACTTCCAAAA
TACCGCCTGT TGGGGACGGA AGTGTCTGAA AAGGCGGAAT ACAAATACCC CAACCCAAGC
TGTGCAAGAT TTGCATAG
|
|---|
| Protein sequence | MITLQCLLEF QNMQDKEIVL DLMCRFSSAM RYAYQRLLEG EKRKDLKKQL SRLFNINTRY
SDDAIFLAQS IITSCKEREQ NPKKLIFGSR KSFEQLKKNH LTGKRRKELK TKWKESRQGN
LYSTGDKSKQ GNLNLRFQWI NNELYLRINT GDRQYIYAKV VRDVKREKDK WIEFMFMLEN
AYKYGEWFPY PVRLKVKNGN VYAFISIDEK LPPITIKRDN GIIGIDVNAY PFHLALAFAS
KDGNLEKYQS ISLNELLEVN SEKRQYLEWQ IAHKIIEIAK EENKAITIEN LKKLPKGKRG
DGFAKLRGRL QKWSYKRLLD KIEILAKRNG IEIRKVNPAY TSVIGKLKYA PQYNIDKDIA
GAYVIARRGL GYKEKLPKNY KELLNDADFL SYTIAKIEDD IKRLKEDLKE EKNEYKRNGL
KSKLAKLRKS LKTLQKYLES GKSESSSRQP VNRRKEQVRG LPTSRHKSWQ VLSIALAFCC
LEKSYRDFSP LKRVIVSKDW TVVANRLAPV LGTGTMTLPK YRLLGTEVSE KAEYKYPNPS
CARFA
|
|---|
| |