Gene SYO3AOP1_0080 details

Gene Information

• Locus tag: SYO3AOP1_0080
• ID: 6331270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 89803
• End bp: 90336
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642656360
• Product: small GTP-binding protein
• Protein accession: YP_001930282
• Protein GI: 188996031
• COG category: [R] General function prediction only
• COG ID: [COG2229] Predicted GTPase
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.0120715
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGAAA AGAAAATAAA AATAGTAGTT GCAGGACCTT ACGCTGCAGG AAAAACACAA 
TTCATAAATA CAATTAGTGA AATAGAAACT GTAAAAACAG AGGCAAGAAC TACAAAAGTT 
GGAGAGAAAG AAAAGAAAGA TCACACTACA GTTGCTATGG ATTTTGGAAG GATAAAAATA 
GATGATGAAC ATACACTTTA TTTATTTGGA ACACCTGGTC AAGCAAGATT TGATTTTATG 
TGGGATATTC TTGGTAAAGG TATGGTTGGA TTGGTTGTAT TAGTAGACAG TACGGATCCT 
GCCACATTTC ATGAGGCAAG AAGAATTATA AATTTTTTTG AAGCAAGGTA TCCAGCTCCA 
TTTGTTGTTG GTGCAAATAA GCAAGATTTA AAAGAAGCAT GGAATCCTGA AGATATTAGA 
ACAGCTTTGG ATTTAGGAGA AGAAATAAAA GTAATACCAC TAATTGCAAC AGACAAAGAA 
AATGTTAAAA GAGTGCTTTT AGAGTTATTG GAAGAAATCT CAAAATATAT CTAA 

 

Protein sequence

MAEKKIKIVV AGPYAAGKTQ FINTISEIET VKTEARTTKV GEKEKKDHTT VAMDFGRIKI 
DDEHTLYLFG TPGQARFDFM WDILGKGMVG LVVLVDSTDP ATFHEARRII NFFEARYPAP 
FVVGANKQDL KEAWNPEDIR TALDLGEEIK VIPLIATDKE NVKRVLLELL EEISKYI