Gene SYO3AOP1_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0076 
Symbol 
ID6331266 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp87415 
End bp87783 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content29% 
IMG OID642656356 
Productputative sensor with HAMP domain 
Protein accessionYP_001930278 
Protein GI188996027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.568752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT CGGTGTTAGA CAAAATATTT CTTATAGTTT TGGGAGGTTC ATTTATAGGT 
GCTATTTTTG TAGCAGTTCT CGTTTTCTTT TTAACATCAG AATTTTCTAA GTCTTTAATA
GCACTGATAG GATCGCAAAT TTTATTTTTA ATCCCGGTTT TTGGAATTAG AAAAATTATT
GATGATACAA TAATTAAAAA ACTAAGTGTA GTATCTCAAG CTATGCAAGA AGTTAGTATG
GGAAATCTTG ATTATGAGAT AAAGGTAGAA AAAACCGGAG ACGAATTAGA AGAGTTAGCT
GAATCCTTTG AAAGAATGAG GATTAGCTTA AAAACAATTA TGGAAAAATT AGAAAAAGGT
GAGCTTTAA
 
Protein sequence
MKKSVLDKIF LIVLGGSFIG AIFVAVLVFF LTSEFSKSLI ALIGSQILFL IPVFGIRKII 
DDTIIKKLSV VSQAMQEVSM GNLDYEIKVE KTGDELEELA ESFERMRISL KTIMEKLEKG
EL