Gene SYO3AOP1_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0071 
Symbol 
ID6331261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp83189 
End bp83860 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content27% 
IMG OID642656351 
Productprotein of unknown function DUF45 
Protein accessionYP_001930273 
Protein GI188996022 
COG category[R] General function prediction only 
COG ID[COG1451] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGATA TTAGAATTGA AAAGATAATC AGGTCAAACA GGAAAACTAT AGCAATAAAG 
CCCACAGAAA ATGGAGCTAT AATTGTGAAA GCTCCTAAAA AAGCAACGAA TAAATTAATC
ATTGATGTCA TTGAACAACA TAAGGATAGA ATTCTTGAAA AATTAAAAGA ATTGGAAAAA
ATCAAGGAAA TTAATTTTAA ACAGTTTGTT GCTGGTGAAG AATTTCTTTA TATTGGTAAA
GCTTATAAAC TCTACATCGT AGAAAATCTT GAAACTCCGT TAAAATTTCA AGATGGATTT
TATTTATCAA GGGATTATCA AAATCAAGGA AGAGAAATAT TTACTGATTG GTATAAAAAT
CAAGCCAAAA TTATTATTCC TAACAGAGTA ATCCATTGGG CTGGAAAATG TGGATACAAT
ATTAAAAAAA TAGGAATAAC CAATGCTAAC AGGCAATGGG GTTCATGTTC AGCAAAAGGT
AATTTGAATT TTTCTTGGCG TTTAATACTA GCACCTTTAG AAGTGATTGA TTATGTAATT
GTTCATGAAC TTTCTCATTT AAAAGAACTT AACCATAGTA AAAATTTTTG GAATAAGGTT
AAAAAATGTA TGCCTGAATA TAAAGAGTAT CATGATTGGT TAAGAAAAAA TAGTTTTAAA
TTAAAGTTTT AA
 
Protein sequence
MNDIRIEKII RSNRKTIAIK PTENGAIIVK APKKATNKLI IDVIEQHKDR ILEKLKELEK 
IKEINFKQFV AGEEFLYIGK AYKLYIVENL ETPLKFQDGF YLSRDYQNQG REIFTDWYKN
QAKIIIPNRV IHWAGKCGYN IKKIGITNAN RQWGSCSAKG NLNFSWRLIL APLEVIDYVI
VHELSHLKEL NHSKNFWNKV KKCMPEYKEY HDWLRKNSFK LKF