| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0064 |
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| Symbol | |
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| ID | 6331790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 76562 |
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| End bp | 77419 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642656344 |
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| Product | RNA polymerase, sigma 32 subunit, RpoH |
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| Protein accession | YP_001930266 |
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| Protein GI | 188996015 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.534501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGT TCACCCACGA AGAAAATGTT GACTTTTATC TTAAGTCTAT CTATAAAATT
CCACTATTAT CCAAAGAAGA AGAGGAGTCT TTACTAAAAA AAGTAAAAGA AGGAGATAAA
GAAGCACTTC AAAAGCTTAT TATATCTAAT TTAAGATTTG TAATCAATAT AGCCAAAAGA
TATGCAGGCT ATGGAATCCC ATTTTCTGAC TTAATCTCAG CAGGAAATAT TGGTTTAATA
GAAGCTGCAA AAAAATTTGA TACATCAAGA GGCGTTAGAT TTATATCTTA TGCAGTTTGG
TGGATAAGAC AATCAATCAT AAATACCATT CAGCATGAAA GTGAAATTAT AAAAAAGCCA
AATAGAATGT ACGCTTATGC TTCTAAAATC AATAATGCCT ATTCTTACTT AAAAGATACT
TTAAACAGAG AGCCATCTAT AGACGAGATT ATATCTTTTT TAAAAACTCA AGGTATAAAA
GTTGAAAAAG AAATGGTTGA AAATTACTTC TTATTTAAAA GCGTTTTCTT ATCCTTGGAT
ACACCTATTG AAGGAACAGA TAATGACCTG GTCTTAGAAG ATACGATATC TGTTTATAAT
ACACTTGATA TTGAAAAAGA TATCAATGAA GAAGATTTAA AAAGAGCCAT AGAAGCATTG
TTAGATACTT TATCACCAAG AGAAAGAACT ATCCTTATTC ATAGGTTTGG GCTAAATGGC
GAAGAACCAA AGACATTGAA CGAAGTTGGA GAAATGGTTG GTTTATCAAG GGAAAGAGTA
AGACAAATAG AAAATAGAAT TTTAAAAAAA TTAAGAAAAA TAGCAAAAAT TAAAAAACTT
GAGGACTTGA TTTCATAG
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| Protein sequence | MKKFTHEENV DFYLKSIYKI PLLSKEEEES LLKKVKEGDK EALQKLIISN LRFVINIAKR
YAGYGIPFSD LISAGNIGLI EAAKKFDTSR GVRFISYAVW WIRQSIINTI QHESEIIKKP
NRMYAYASKI NNAYSYLKDT LNREPSIDEI ISFLKTQGIK VEKEMVENYF LFKSVFLSLD
TPIEGTDNDL VLEDTISVYN TLDIEKDINE EDLKRAIEAL LDTLSPRERT ILIHRFGLNG
EEPKTLNEVG EMVGLSRERV RQIENRILKK LRKIAKIKKL EDLIS
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