| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0063 |
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| Symbol | |
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| ID | 6331789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 75256 |
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| End bp | 76482 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656343 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001930265 |
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| Protein GI | 188996014 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0180654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC AGCTAATACT TAGTCTAATA GCAGTACCAT TAATAAACGC ATACAGCATA
ACCTTAGAAG AAACGCTTAA TATTGCAGAA AAAAATGCTA CAAAAATAAG ACTATCAGAT
AAAGATATAG AAAAAGTAGA AGCACAGATA AAAGAAGCAA AAAGTAATAT AATGCCACAA
GCATCCATTA CAGGCTCATA TACAAGATGG GATCCAAACT ATATAACAGG ATTTACACCA
AAAAACCAAT ACTCAGCAAA AGCAGGACTA ACTCAAAAAA TATTTGACTA CCAAGTCTTT
AATCTCATAA AAGTAGCAGA AAGTAATTCA GAACTACAAA AAGTAATAAA AGAAGATATA
AAACAGCAAG TAAAAGACAC AGCAAGAAGA CTATTTCTTA CATCCTTAAC ATACAAAGAA
ATAATGAAAA TAAAAGAAGA AAATCTAAAA TATTGGCAGG AAAACTATAA ATACGTAGAA
GCAAAGTACA ACGTAGGACT ACTTGCAAAA TACGACTTTA TGAGAGCATC ATCACAGCTA
CAATCAGCAA TCGCAGACTA TGAAAACGCA AAAGCAAACT ACGAAAAATC CATAGAAGAC
CTAAAAAGAT TTCTAATGAC AGAAAACATA ACACCACCAG AAGGAAATTT AGAAAAACTA
ACATATAACA AAGAAATAAA CATAGAAAAC AACACAGCAG TAAAAGTAAT AAACCAGCAA
ATAAAAGTAG CACAACAGCA AGTAGAATAC CAAAAATCAG CAAACTATCC ATCACTTTCA
GCATTTTTAA ACTACCAAAC AAACAACCAA GTAAAATATC CATCTACATC AGAAGTATGG
AAAAAAGGCT ACAACCTTGG ATTATCACTA AATTGGACGC TGTTTGACGG TTTTGCAAAA
GACAGTAGAA TACTGCAAGC AAAGATAGAC AAAACAAAAA ATGAGATAAC CTATCAAGAT
AAAATCATGG AATTAAAAAC AACATTAAAC AAAACATTGG CAGATATAAA AGCATTGGAA
CATCAGCTGA TAGCAAATGA AGAAAACCTA AAAGTAGCAA AAGAAGCACT TAGACTATCA
ACAGAAAGAT TTAAAACAAA CATAGCAAAC ACATTAGAAG TATTAGAATC AGAAAATAAC
TACCAATCAG CACAGTTAAC CTATCTAAAC ACGCTTTATA ACTATAATTT AAAAATCTTT
GATTTGATGA ATCTTAATGG TGAGTGA
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| Protein sequence | MKKQLILSLI AVPLINAYSI TLEETLNIAE KNATKIRLSD KDIEKVEAQI KEAKSNIMPQ
ASITGSYTRW DPNYITGFTP KNQYSAKAGL TQKIFDYQVF NLIKVAESNS ELQKVIKEDI
KQQVKDTARR LFLTSLTYKE IMKIKEENLK YWQENYKYVE AKYNVGLLAK YDFMRASSQL
QSAIADYENA KANYEKSIED LKRFLMTENI TPPEGNLEKL TYNKEINIEN NTAVKVINQQ
IKVAQQQVEY QKSANYPSLS AFLNYQTNNQ VKYPSTSEVW KKGYNLGLSL NWTLFDGFAK
DSRILQAKID KTKNEITYQD KIMELKTTLN KTLADIKALE HQLIANEENL KVAKEALRLS
TERFKTNIAN TLEVLESENN YQSAQLTYLN TLYNYNLKIF DLMNLNGE
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