| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0062 |
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| Symbol | |
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| ID | 6331788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 74168 |
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| End bp | 75244 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642656342 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001930264 |
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| Protein GI | 188996013 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0123174 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AAATCATTCC AATACTAATA GCCATAGCAA TCTTAGCCGT TGGCTTATTT
ATAGTCAAGT CTATAAATCC TAAAAAACAA GAACAACCAA AACAAAAACC TACACCGGTT
GTAAAAGTTT TAGAGCTAAA ATCTCAAGAA ATTCCAATGA TTTATACAGC AAATTCAACA
TTACAAGCAA AAACATCGGC AACCTTAAAA CCACAAGTTA ATGGCAGAGT AATAAAATTA
TTTGTAGAAG AAGGACAGTA TGTCAAAGCA GGACAGCCAC TTGCAATAAT CCAACCAGAA
AAAGAACAAT ACCAAGTAGA ATCACAAATT TCAGTTATAG AGCAACTTAG GGCAAACTAT
TTGAATAAAA AAGCTATATA TGAAAGAAGA AAACAGCTGT TTGAAAAGGA ACTTATAGCC
AAAGAAGAAG TTGACAATGC TAAAACAGAT ATGGAAATTG CTTTAAATCA ACTCCGTTCA
GCCGAGGCAA CATTAAAAGA GTATGAAAGA CAAAAAAATG AAACAGTTAT AAAAGCCCCA
TTTGATGGAA TTGTTGACAA AAGATTTATA AGCATTGGAG ATTATGTAGA TAGTCAAACA
CAAATGTTTT ATATCTTAAA GCCTAATCCG TTATGGGCAG TTTTTAGCCT ACCGCAGCAG
TATATAAAAA ATATAAAAAT TGGAGATTTG ATAGATATTG ATATAGATGG AGTAGGAAAG
GTTAAAGGAA AAATAGATTA TATATCTTCA TCCCTTGACC AAAATAACCT GATTGTGGTA
AAAGCATTAG TAGAAAATCC TGATAACAAA TTAAAAGAAA ATATGTACGG CAAAGCCAAT
ATAGTTATTG ATGTAAAAAA AGGATTTAGA ATTCCTGAGC AAGCTTTACT TTTAGCAGGA
AATGAAAGTT TTGTGTATAA AATCCAGGAC GGAAAAGCTT TTAAAGTAAA AGTAGATGTA
ATCAATCAAT CTTTTGGCTA TGTAGATATA GTGGGAAACC TTCAAGAAGG TGATAAAATA
GCAATTACAA ACTTAATGAT GCTAAAAGAT GGAATGCCGG TTAAAGCTAT AAACTAA
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| Protein sequence | MKNKIIPILI AIAILAVGLF IVKSINPKKQ EQPKQKPTPV VKVLELKSQE IPMIYTANST
LQAKTSATLK PQVNGRVIKL FVEEGQYVKA GQPLAIIQPE KEQYQVESQI SVIEQLRANY
LNKKAIYERR KQLFEKELIA KEEVDNAKTD MEIALNQLRS AEATLKEYER QKNETVIKAP
FDGIVDKRFI SIGDYVDSQT QMFYILKPNP LWAVFSLPQQ YIKNIKIGDL IDIDIDGVGK
VKGKIDYISS SLDQNNLIVV KALVENPDNK LKENMYGKAN IVIDVKKGFR IPEQALLLAG
NESFVYKIQD GKAFKVKVDV INQSFGYVDI VGNLQEGDKI AITNLMMLKD GMPVKAIN
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