Gene SYO3AOP1_0059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0059 
Symbol 
ID6331752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp70409 
End bp71191 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content31% 
IMG OID642656340 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_001930262 
Protein GI188996011 
COG category[R] General function prediction only 
COG ID[COG1161] Predicted GTPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.800533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAACA AACCAAGAGA ATGGCTTAGA GAAAAAAGCA TAGCTAAAAA GGTTCTTACA 
GAATCTAATT TGATTTTAGA AGTGGTTGAT GCAAGAATTC CTTTTGAAAC AAGAAATAGC
GTAATTGAAA GTTTAGCAAA AGAAAGGAAT AAAAGTTTAA TTGTAGTCTT AAACAAATCA
GACCTTGTTC CAAGGGAGTT TATTAAAGAA GTCAAAGAAA AAATTGAAAA AGAATTTCCG
GCGGTAATTT TTTCCGCACA TAAAAATATT GGTGTTAAAG AGCTATTTGA TAAAATTAAA
GAGTTTTCCA ACGAGAAAAA AATTATAAAA ATTGGTGTTT TGGGTTATCC AAATGTTGGA
AAATCTTCTG TAATTAATAC ATTAAAAAGA AAAAAGGTAG CAACAACTTC ACCAAAACCA
GGGATGACCG TTGGAGAAAA GCTTGTAAAA CTTGACGAGA ATATATTTTT GATAGACACT
CCCGGTATAA TAACCTTAGA GTTTCCTGAA GATTTAGCAT TAAAAGGTTC TTGGATTCCG
GATAAATTAG AACAGCCGGC AGATGTTGCT TTAAAATTGA TAGAAAAAAT ATTGACTAAC
AAAAAAGATG CACTTGAAGA AGCATATAAA TTAAAATTAC CTGATGAACC TATGGCAGCT
TTTGAAGGAA TAGGCAGAAA GTTAAATTAC AAAATTTCAG GTGGTGAGAT TGATTATGAT
AGAGTTGCTA AAAAGATTTT ATGGGATTGG CTGAAAGGAA ATATAAAAGC TTACTGGATG
TAA
 
Protein sequence
MTNKPREWLR EKSIAKKVLT ESNLILEVVD ARIPFETRNS VIESLAKERN KSLIVVLNKS 
DLVPREFIKE VKEKIEKEFP AVIFSAHKNI GVKELFDKIK EFSNEKKIIK IGVLGYPNVG
KSSVINTLKR KKVATTSPKP GMTVGEKLVK LDENIFLIDT PGIITLEFPE DLALKGSWIP
DKLEQPADVA LKLIEKILTN KKDALEEAYK LKLPDEPMAA FEGIGRKLNY KISGGEIDYD
RVAKKILWDW LKGNIKAYWM