Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0059 |
Symbol | |
ID | 6331752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 70409 |
End bp | 71191 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 642656340 |
Product | GTP-binding protein HSR1-related |
Protein accession | YP_001930262 |
Protein GI | 188996011 |
COG category | [R] General function prediction only |
COG ID | [COG1161] Predicted GTPases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.800533 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAACA AACCAAGAGA ATGGCTTAGA GAAAAAAGCA TAGCTAAAAA GGTTCTTACA GAATCTAATT TGATTTTAGA AGTGGTTGAT GCAAGAATTC CTTTTGAAAC AAGAAATAGC GTAATTGAAA GTTTAGCAAA AGAAAGGAAT AAAAGTTTAA TTGTAGTCTT AAACAAATCA GACCTTGTTC CAAGGGAGTT TATTAAAGAA GTCAAAGAAA AAATTGAAAA AGAATTTCCG GCGGTAATTT TTTCCGCACA TAAAAATATT GGTGTTAAAG AGCTATTTGA TAAAATTAAA GAGTTTTCCA ACGAGAAAAA AATTATAAAA ATTGGTGTTT TGGGTTATCC AAATGTTGGA AAATCTTCTG TAATTAATAC ATTAAAAAGA AAAAAGGTAG CAACAACTTC ACCAAAACCA GGGATGACCG TTGGAGAAAA GCTTGTAAAA CTTGACGAGA ATATATTTTT GATAGACACT CCCGGTATAA TAACCTTAGA GTTTCCTGAA GATTTAGCAT TAAAAGGTTC TTGGATTCCG GATAAATTAG AACAGCCGGC AGATGTTGCT TTAAAATTGA TAGAAAAAAT ATTGACTAAC AAAAAAGATG CACTTGAAGA AGCATATAAA TTAAAATTAC CTGATGAACC TATGGCAGCT TTTGAAGGAA TAGGCAGAAA GTTAAATTAC AAAATTTCAG GTGGTGAGAT TGATTATGAT AGAGTTGCTA AAAAGATTTT ATGGGATTGG CTGAAAGGAA ATATAAAAGC TTACTGGATG TAA
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Protein sequence | MTNKPREWLR EKSIAKKVLT ESNLILEVVD ARIPFETRNS VIESLAKERN KSLIVVLNKS DLVPREFIKE VKEKIEKEFP AVIFSAHKNI GVKELFDKIK EFSNEKKIIK IGVLGYPNVG KSSVINTLKR KKVATTSPKP GMTVGEKLVK LDENIFLIDT PGIITLEFPE DLALKGSWIP DKLEQPADVA LKLIEKILTN KKDALEEAYK LKLPDEPMAA FEGIGRKLNY KISGGEIDYD RVAKKILWDW LKGNIKAYWM
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