Gene SYO3AOP1_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0037 
SymboluvrA 
ID6331765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp43978 
End bp46740 
Gene Length2763 bp 
Protein Length920 aa 
Translation table11 
GC content36% 
IMG OID642656315 
Productexcinuclease ABC subunit A 
Protein accessionYP_001930240 
Protein GI188995989 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAAGA TAGTAATTCA TGGTGCAAGA CAACATAACT TAAAAAATAT AGATTTAGAA 
CTGCCAAAGA ATAAATTAAT AGTTATCACC GGACCATCTG GCTCCGGGAA ATCTTCATTG
GCTTTTGATA CGATTTATGC AGAAGGTCAA AGAAGATATG TAGAAAGCCT GTCAGCTTAT
GCAAGACAGT TTCTTGGAGT AATGGAAAAA CCTGATGTAG ATAGTATAGA AGGACTATCT
CCCGCAATAG CAATAGACCA AAAAACCACA TCTAAAAATC CACGTTCAAC AGTTGGAACA
ATAACAGAAA TTTATGATTA TTTAAGACTC TTATTTGCAA GGGCAGGAAA ACCACACTGT
CCGGAATGTG GGGTTGAAAT CTCATCCCAA TCTGCACAAG AAATATCAGA AAGTATAATG
TCTTTGCCGG AGGGAACAAA AATACAGATA ATCGCACCAA TCATTAGGGG ACAAAAAGGA
GAGCATAAAG ACACCTTAGA AAAGTTAAAA AGGCTTGGAT ATCCAAGATT AAGAATAGAT
GGAGAAGTGT ATCTTACAGA AGAAGTTCCA AAGCTTGATA AAAACAAAAA ACATACGATT
GAAGTTGTAA TAGATAGAAT TGTTATAAAA GAAGGTTCAA GAACAAGAGT TAATGACTCT
GTGGAGCAGG CTTTAAAGCT TTCCGATGGA CTTGTGGTTG TAAATCTTGT AGATGAAGGT
AAAGATATTA TTTACAGTGA AAAGTTTGCA TGTCCTATTC ATAACTTCTC CATTCCTGAG
CTTTCGCCAA GACTTTTTTC TTTTAACAGT CCTTATGGAG CGTGTCCAAC CTGTAAAGGT
CTTGGAGTTA TTCATAAAAT TGATGAAAAT CTTTTAATAG ATGAAGAAAG AGTAGCCACA
GAAGCTTTTA GAATAGCCGA GAATATCTCT TTTAAATACA TAAAAGCAAT GGTTAGCGAT
TATTTAACTT TTAATAGAAT TCCAAGGCTT AAAAAATTCA AAGAACTGCC ACAGCATGTA
AAGGAAGAGA TTCTTTATGG TAATGGATAT TTTGAAGGTG TAATTCCACA CCTTGAAAGA
AAATTCTTAG AAACAGATAA CGAAAAATAC AGAGAAGAAA TAGGGAAATA CATTAAAGAA
ATTCAATGTC CGGAGTGTAA AGGTGCAAGG TTAAGAAAAG AAGCATTAAC TGTACTTGTC
AACGGCAAGA ATATTTACGA TGTTGTAAAA ATGGATATAG CCAAAGCTTT TGAGTTTTTC
CAAGAGTATG AGAGCGTACC GAAAACAGAA AAAGAAAAAT TAATCTCAGA AAAGATTGTA
AAAGAGATAA AAGAAAGATT AAAGTTTTTA TTAGATGTTG GACTTGATTA TCTAACCCTT
GACAGGACGG CTACAACTTT AAGCGGTGGA GAATCTCAAA GAATTAGACT TGCTACTCAA
ATAGGCTCTA AATTGTCGGG TGTTTTATAC GTTCTTGATG AGCCATCCAT AGGACTTCAT
CCAAGAGATA CAGAAAAGCT AATCAATACA TTAAAAGAGC TTAGAGACCT TGGAAACACT
GTTATAGTAG TAGAACATGA CCCGGAGACT ATTGAAGAGG CAGATTATAT TGTTGATATT
GGACCGGGTA GTGGTGTATA CGGTGGCTAT ATTACAGCAG TTGGAACTGT TGAAGAGATA
AAAAATAACC CAAATTCATT AACAGGTAAA TATTTAAGCG GAAAGCTAAA AATTCCACTG
CCGGCAAAAA GAAGACCCCC AAATGATAAT AAATACTTAA TCATTCATGG TGCAAAAGAG
CATAATCTAA AAAATATAGA TGTAAAAATT CCACTTGGAT TGTTTGTGGC TATTACAGGA
GTATCAGGAA GCGGAAAATC AACGCTGATA TACGATATCT TATGGCAAGC AGCTAAAAAC
AGATTCCATG GGTCAAACGA ATACGTAGGC AAGCATGAAA AAATAGAAGG ATGGGAGCAT
ATAGACAAAG TTATAAACGT AGACCAATCA CCCATAGGAA GAACGCCAAG GTCAAACCCG
GCAACCTACA CAAAAGTTTT TGACTTAATA AGAGAGCTTT ACGCATCTAC TCCTGAGGCA
AAAATAAGAG GATACGACCC AGGAAGGTTT TCTTTTAACG TAAAAGGAGG AAGATGTGAA
GCATGCCAAG GTGAAGGCGT AGTTAAAATT GAGATGCACT TTCTGCCGGA TATATACGTA
ACCTGTGAAG TTTGCGGTGG AAAAAGATAC AACAAAGAAA CTTTATCGGT TTTATACAAA
GGAAAAAGTA TTGCAGATGT TCTTGATATG ACAGTTGCAG AAGCTTTGGA ATTTTTTGAA
AATATTCCAT CTATTAGAAA CAAATTAAAA CTTTTGCACG ATGTGGGTCT TGATTATATA
AAACTTGGAC AACCAGCAAC CACGTTGAGC GGAGGAGAAG CTCAAAGAAT AAAACTTTCA
AGAGAACTGT CAAAGAGAGA TACAGGGAAA ACTCTTTACC TGTTAGATGA ACCAACAACA
GGTTTGCATT CTCATGATGT AGCAAAGCTA ATACAGGTTT TAAATAAGCT TGTAGAAAAG
GGTAACACTG TTGTTGTGAT AGAACATAAT CTTGATGTTA TAAAGTGTGC AGATTGGATT
ATAGACCTTG GGCCAGAAGG CGGTGATAGA GGTGGTTATA TTGTTGCAGA AGGAACGCCA
GACATGGTTG CAAACAATGA AAAATCTTAT ACAGGAAAGT TTTTGAAAAA GTATTTAAAG
TAG
 
Protein sequence
MDKIVIHGAR QHNLKNIDLE LPKNKLIVIT GPSGSGKSSL AFDTIYAEGQ RRYVESLSAY 
ARQFLGVMEK PDVDSIEGLS PAIAIDQKTT SKNPRSTVGT ITEIYDYLRL LFARAGKPHC
PECGVEISSQ SAQEISESIM SLPEGTKIQI IAPIIRGQKG EHKDTLEKLK RLGYPRLRID
GEVYLTEEVP KLDKNKKHTI EVVIDRIVIK EGSRTRVNDS VEQALKLSDG LVVVNLVDEG
KDIIYSEKFA CPIHNFSIPE LSPRLFSFNS PYGACPTCKG LGVIHKIDEN LLIDEERVAT
EAFRIAENIS FKYIKAMVSD YLTFNRIPRL KKFKELPQHV KEEILYGNGY FEGVIPHLER
KFLETDNEKY REEIGKYIKE IQCPECKGAR LRKEALTVLV NGKNIYDVVK MDIAKAFEFF
QEYESVPKTE KEKLISEKIV KEIKERLKFL LDVGLDYLTL DRTATTLSGG ESQRIRLATQ
IGSKLSGVLY VLDEPSIGLH PRDTEKLINT LKELRDLGNT VIVVEHDPET IEEADYIVDI
GPGSGVYGGY ITAVGTVEEI KNNPNSLTGK YLSGKLKIPL PAKRRPPNDN KYLIIHGAKE
HNLKNIDVKI PLGLFVAITG VSGSGKSTLI YDILWQAAKN RFHGSNEYVG KHEKIEGWEH
IDKVINVDQS PIGRTPRSNP ATYTKVFDLI RELYASTPEA KIRGYDPGRF SFNVKGGRCE
ACQGEGVVKI EMHFLPDIYV TCEVCGGKRY NKETLSVLYK GKSIADVLDM TVAEALEFFE
NIPSIRNKLK LLHDVGLDYI KLGQPATTLS GGEAQRIKLS RELSKRDTGK TLYLLDEPTT
GLHSHDVAKL IQVLNKLVEK GNTVVVIEHN LDVIKCADWI IDLGPEGGDR GGYIVAEGTP
DMVANNEKSY TGKFLKKYLK