Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0037 |
Symbol | uvrA |
ID | 6331765 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 43978 |
End bp | 46740 |
Gene Length | 2763 bp |
Protein Length | 920 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656315 |
Product | excinuclease ABC subunit A |
Protein accession | YP_001930240 |
Protein GI | 188995989 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAGA TAGTAATTCA TGGTGCAAGA CAACATAACT TAAAAAATAT AGATTTAGAA CTGCCAAAGA ATAAATTAAT AGTTATCACC GGACCATCTG GCTCCGGGAA ATCTTCATTG GCTTTTGATA CGATTTATGC AGAAGGTCAA AGAAGATATG TAGAAAGCCT GTCAGCTTAT GCAAGACAGT TTCTTGGAGT AATGGAAAAA CCTGATGTAG ATAGTATAGA AGGACTATCT CCCGCAATAG CAATAGACCA AAAAACCACA TCTAAAAATC CACGTTCAAC AGTTGGAACA ATAACAGAAA TTTATGATTA TTTAAGACTC TTATTTGCAA GGGCAGGAAA ACCACACTGT CCGGAATGTG GGGTTGAAAT CTCATCCCAA TCTGCACAAG AAATATCAGA AAGTATAATG TCTTTGCCGG AGGGAACAAA AATACAGATA ATCGCACCAA TCATTAGGGG ACAAAAAGGA GAGCATAAAG ACACCTTAGA AAAGTTAAAA AGGCTTGGAT ATCCAAGATT AAGAATAGAT GGAGAAGTGT ATCTTACAGA AGAAGTTCCA AAGCTTGATA AAAACAAAAA ACATACGATT GAAGTTGTAA TAGATAGAAT TGTTATAAAA GAAGGTTCAA GAACAAGAGT TAATGACTCT GTGGAGCAGG CTTTAAAGCT TTCCGATGGA CTTGTGGTTG TAAATCTTGT AGATGAAGGT AAAGATATTA TTTACAGTGA AAAGTTTGCA TGTCCTATTC ATAACTTCTC CATTCCTGAG CTTTCGCCAA GACTTTTTTC TTTTAACAGT CCTTATGGAG CGTGTCCAAC CTGTAAAGGT CTTGGAGTTA TTCATAAAAT TGATGAAAAT CTTTTAATAG ATGAAGAAAG AGTAGCCACA GAAGCTTTTA GAATAGCCGA GAATATCTCT TTTAAATACA TAAAAGCAAT GGTTAGCGAT TATTTAACTT TTAATAGAAT TCCAAGGCTT AAAAAATTCA AAGAACTGCC ACAGCATGTA AAGGAAGAGA TTCTTTATGG TAATGGATAT TTTGAAGGTG TAATTCCACA CCTTGAAAGA AAATTCTTAG AAACAGATAA CGAAAAATAC AGAGAAGAAA TAGGGAAATA CATTAAAGAA ATTCAATGTC CGGAGTGTAA AGGTGCAAGG TTAAGAAAAG AAGCATTAAC TGTACTTGTC AACGGCAAGA ATATTTACGA TGTTGTAAAA ATGGATATAG CCAAAGCTTT TGAGTTTTTC CAAGAGTATG AGAGCGTACC GAAAACAGAA AAAGAAAAAT TAATCTCAGA AAAGATTGTA AAAGAGATAA AAGAAAGATT AAAGTTTTTA TTAGATGTTG GACTTGATTA TCTAACCCTT GACAGGACGG CTACAACTTT AAGCGGTGGA GAATCTCAAA GAATTAGACT TGCTACTCAA ATAGGCTCTA AATTGTCGGG TGTTTTATAC GTTCTTGATG AGCCATCCAT AGGACTTCAT CCAAGAGATA CAGAAAAGCT AATCAATACA TTAAAAGAGC TTAGAGACCT TGGAAACACT GTTATAGTAG TAGAACATGA CCCGGAGACT ATTGAAGAGG CAGATTATAT TGTTGATATT GGACCGGGTA GTGGTGTATA CGGTGGCTAT ATTACAGCAG TTGGAACTGT TGAAGAGATA AAAAATAACC CAAATTCATT AACAGGTAAA TATTTAAGCG GAAAGCTAAA AATTCCACTG CCGGCAAAAA GAAGACCCCC AAATGATAAT AAATACTTAA TCATTCATGG TGCAAAAGAG CATAATCTAA AAAATATAGA TGTAAAAATT CCACTTGGAT TGTTTGTGGC TATTACAGGA GTATCAGGAA GCGGAAAATC AACGCTGATA TACGATATCT TATGGCAAGC AGCTAAAAAC AGATTCCATG GGTCAAACGA ATACGTAGGC AAGCATGAAA AAATAGAAGG ATGGGAGCAT ATAGACAAAG TTATAAACGT AGACCAATCA CCCATAGGAA GAACGCCAAG GTCAAACCCG GCAACCTACA CAAAAGTTTT TGACTTAATA AGAGAGCTTT ACGCATCTAC TCCTGAGGCA AAAATAAGAG GATACGACCC AGGAAGGTTT TCTTTTAACG TAAAAGGAGG AAGATGTGAA GCATGCCAAG GTGAAGGCGT AGTTAAAATT GAGATGCACT TTCTGCCGGA TATATACGTA ACCTGTGAAG TTTGCGGTGG AAAAAGATAC AACAAAGAAA CTTTATCGGT TTTATACAAA GGAAAAAGTA TTGCAGATGT TCTTGATATG ACAGTTGCAG AAGCTTTGGA ATTTTTTGAA AATATTCCAT CTATTAGAAA CAAATTAAAA CTTTTGCACG ATGTGGGTCT TGATTATATA AAACTTGGAC AACCAGCAAC CACGTTGAGC GGAGGAGAAG CTCAAAGAAT AAAACTTTCA AGAGAACTGT CAAAGAGAGA TACAGGGAAA ACTCTTTACC TGTTAGATGA ACCAACAACA GGTTTGCATT CTCATGATGT AGCAAAGCTA ATACAGGTTT TAAATAAGCT TGTAGAAAAG GGTAACACTG TTGTTGTGAT AGAACATAAT CTTGATGTTA TAAAGTGTGC AGATTGGATT ATAGACCTTG GGCCAGAAGG CGGTGATAGA GGTGGTTATA TTGTTGCAGA AGGAACGCCA GACATGGTTG CAAACAATGA AAAATCTTAT ACAGGAAAGT TTTTGAAAAA GTATTTAAAG TAG
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Protein sequence | MDKIVIHGAR QHNLKNIDLE LPKNKLIVIT GPSGSGKSSL AFDTIYAEGQ RRYVESLSAY ARQFLGVMEK PDVDSIEGLS PAIAIDQKTT SKNPRSTVGT ITEIYDYLRL LFARAGKPHC PECGVEISSQ SAQEISESIM SLPEGTKIQI IAPIIRGQKG EHKDTLEKLK RLGYPRLRID GEVYLTEEVP KLDKNKKHTI EVVIDRIVIK EGSRTRVNDS VEQALKLSDG LVVVNLVDEG KDIIYSEKFA CPIHNFSIPE LSPRLFSFNS PYGACPTCKG LGVIHKIDEN LLIDEERVAT EAFRIAENIS FKYIKAMVSD YLTFNRIPRL KKFKELPQHV KEEILYGNGY FEGVIPHLER KFLETDNEKY REEIGKYIKE IQCPECKGAR LRKEALTVLV NGKNIYDVVK MDIAKAFEFF QEYESVPKTE KEKLISEKIV KEIKERLKFL LDVGLDYLTL DRTATTLSGG ESQRIRLATQ IGSKLSGVLY VLDEPSIGLH PRDTEKLINT LKELRDLGNT VIVVEHDPET IEEADYIVDI GPGSGVYGGY ITAVGTVEEI KNNPNSLTGK YLSGKLKIPL PAKRRPPNDN KYLIIHGAKE HNLKNIDVKI PLGLFVAITG VSGSGKSTLI YDILWQAAKN RFHGSNEYVG KHEKIEGWEH IDKVINVDQS PIGRTPRSNP ATYTKVFDLI RELYASTPEA KIRGYDPGRF SFNVKGGRCE ACQGEGVVKI EMHFLPDIYV TCEVCGGKRY NKETLSVLYK GKSIADVLDM TVAEALEFFE NIPSIRNKLK LLHDVGLDYI KLGQPATTLS GGEAQRIKLS RELSKRDTGK TLYLLDEPTT GLHSHDVAKL IQVLNKLVEK GNTVVVIEHN LDVIKCADWI IDLGPEGGDR GGYIVAEGTP DMVANNEKSY TGKFLKKYLK
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