| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0031 |
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| Symbol | |
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| ID | 6331759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 35561 |
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| End bp | 38563 |
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| Gene Length | 3003 bp |
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| Protein Length | 1000 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642656311 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001930236 |
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| Protein GI | 188995985 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 78 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTGTA GAATTTTTGA TGATTTTGGA ACTCCACCAA GCAATAGTGA AAAATTGATT
ACAGTTGAAA TAGATGGCAA AGAAGTATCA GTTCCAGAAA AAACATCTGT TTTAAGAGCT
GCAAAAATGG CTGGTATAGA TATTCCAAAA TTATGCTCCA CAGACACACT TAAACCAGTT
GGTTCATGTA GACTATGCAT TGTAGAGATT GAAGGTAAAA AAGGATATCC GACAGCATGT
ACAACCCCCG TTGAAGAAGG AATGAAAGTT AAAACGAATT CGGAAAAGAT ACAAAAATTA
AGAAGAGGAA TATTAGAACT ATATATTTCA GACCATGCTT TAAGATGTGG AATATGTCCG
GCAAATGGCT CGTGTGAACT TCAAAGGGCC TTAAGCTTGG TTGGTGTTAG AGAATTTAAA
TATAAAAAAG GATTAAATCA TTGTGATTTA CCAGTGGACA ATAGCAATCC ATACTTTGTT
TTTGACCCAT CAAAATGTAT TATGTGTTAT AGATGTGTGG AGGCATGCAA TGAAATTCAA
GGAACATATG CTTTAGCAGT TGAAGGAAGA GGATTTAACT CTAAGATAAA ACCCGGAATT
GATGGGCTTT TTATAAATTC TGAATGCGTT TCCTGTGGAG CGTGTGTAAT TAACTGTCCT
ACAGGAGCTC TTGTAGAGAA AAAAGTAGTT GAACATGGTA GAGGGAATAG ATTTGTTAAA
ACTGTGTGTC CATACTGTGG CGTTGGATGT TCATTTTATG CCGAAGTCAG TGGAAATAAC
GTAATCAGAA TGATTCCAGA CAAAAAGGGT AAGGCCAATC AAGGCCATGC ATGCATAAAA
GGAAGATTTG CTTGGTATTA TATATATTCA AAAGGCAGGA TAACAAAGCC AATGATCCGT
AAAGGCATTA ATGAACCTTG GAGAGAATGC ACATGGGAAG AGGTAATAAA CTTTGTTGCT
AACAAATTTA AGTCAATTCA GGAAAAATAT GGTAGATATT CTATTGGGGC AGTTACTTCT
TCAAGGTGTA CAAACGAAGA AACATATTTA TTGCAGAAAC TTGTAAGAAC TGCTTTTAGA
AATAATAATG TTGATAACTG TGCCAGGGTA TGCCACGCAC CAACAGGATA TGGCTTAAAA
ACAGCATTTG GTACATCTGC CGGGACAAAT GAGTTTAATT CAGTTTTAAA ATCTGATGTA
ATAATGATAA TTGGAGCAAA TATTACAGAA GGTCATCCTG TTTTTGGTTC CTTAGTAAAA
AGAAGAGTTA GAGATGGGGC TAAACTAATT GTAATAGACC CAAGAAAAAT AGAGATTTCA
GACTCTCCTC ACGTTAAAGC TGACATCCAT CTTCAGTTGA GACCGGGTTC AAATGTTCCG
CTTTTAAATG CTATGGCTCA TGTAATCATA TCTGAGAATT TAGAAGATGA AGAATTTATA
AAATCAAGAT GTGATTTAGA AACATATGAA AGATGGAAAG AATTTATTTT AAAAGAAGAA
AATTCGCCAG AATATGTAGA AAAAATAACA GGAGTACTTG CAAGTCAGAT AAAAGAAGCT
GCAAGATTGT ACGCAAAAGC AGAAAAAGGG TCAATATACT ATGGTCTTGG AATAACCGAA
CATACACAGG GAACAACAGC AGTTTATGCT TTAGCCAACC TTGCTATGAT TACAGGTAAC
GTTGGAAGAG AGGGAACAGG TGTTAATCCT CTAAGAGGTC AAAACAACGT TCAAGGTTCT
AATGATATGG GGTCATTTCC CCATGACCTA AGTGGATACA GACATGTTTC AGACCAGGCA
ACAAGAAAAT TATTTGAAGA GGCATGGAAT GTAGATATAG ACCCAGAACC CGGGTTAAGA
ATCCAAGATA TGCTTCAGCT TGCAATAGAT GGAAAATTTA AAGGTATTTA TCTTCATGGT
TTTGACCTAG TTCAATCGCT AACAGATACA AACTATGTTA TTGAAGCATT AAAGTCAATG
GAGTTAGTGG TTGTCCATGA TTTATTTTTG AACGAGACAG CAAAGTATGC TCATGTATTC
ATTCCTGGAT GCTCTTTCTT AGAAAAAGAA GGGACGTTTA CAAACGCTGA AAGAAGAGTT
CAACTTCTTA AAAAAGTCAT TAAACCTATG TGTGATAAAC AAGAGTGGGA GGTCTTTTGT
GAAATAGCAA GAGTGATGGG ATATGATATT AGCTATCAGA ATTCTCAGGA GATCATGGAA
GAAATATCGA AGCTAACCCT AACATACAAC GGAATTACAT ATGAAAAATT GGAAAAGTTT
GGAGGTATTC AATGGCCTTG CAATGAAAAT GCTCCGTACG GCACTCCTAC ATTGCATAAA
GATGGTTTTC TAATTGGAAA AGGAAAATTC TTTATTACTG GATACATTCC TTCAAAAGAA
AAAATATCAT CAAATTATCC ATTGATTTTA ACAACGGGAA GAAATCTATT TCAGTATAAC
GTTGGTACTA ACACAAGAAG AACTTTTAAT ATCAATTTTT ACAAAGAAGA TATTTTAGAA
ATAAATCCAA TGGACGCAAA AGCAAAAAAT ATAAAAGATG GAGATTATGT TAGATTAAAA
GGTGAAAATG GTTCTATAGT AATAAAAGCA AAAATAACGG AAAGGGTTAG TCCCGGAGTG
GTGTTTTCAA CTTTCCATTT TCCTGAGACA AAAACAAATG TTCTAACAAA AAATAATTTT
GATTGGGCAA CACTATGTCC AGAGTATAAA TTTACAGCTG TTGATGTTGA ACCTATTGAA
AAACCGATTT CAGAATCTGA GCCAGAATTA AAAGAATCGG GAGAAAATAT AATCATTGAT
ATGGCAAATA GAATTGGGTT ATTTTTTGAA TTTTATGAAA AAGAAGACAG TATTAAAGCA
ATAGTTGATC ACTTTAAAAA ATTCTGGCAT CCTTTGTTGA GAGAAAAATT AAAACAATTC
AAAGATGATA AGGCTTTATT ACAAATTGTT AAAGAAGCAA TTGAAATTTT AGACAGCAAT
TAG
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| Protein sequence | MICRIFDDFG TPPSNSEKLI TVEIDGKEVS VPEKTSVLRA AKMAGIDIPK LCSTDTLKPV
GSCRLCIVEI EGKKGYPTAC TTPVEEGMKV KTNSEKIQKL RRGILELYIS DHALRCGICP
ANGSCELQRA LSLVGVREFK YKKGLNHCDL PVDNSNPYFV FDPSKCIMCY RCVEACNEIQ
GTYALAVEGR GFNSKIKPGI DGLFINSECV SCGACVINCP TGALVEKKVV EHGRGNRFVK
TVCPYCGVGC SFYAEVSGNN VIRMIPDKKG KANQGHACIK GRFAWYYIYS KGRITKPMIR
KGINEPWREC TWEEVINFVA NKFKSIQEKY GRYSIGAVTS SRCTNEETYL LQKLVRTAFR
NNNVDNCARV CHAPTGYGLK TAFGTSAGTN EFNSVLKSDV IMIIGANITE GHPVFGSLVK
RRVRDGAKLI VIDPRKIEIS DSPHVKADIH LQLRPGSNVP LLNAMAHVII SENLEDEEFI
KSRCDLETYE RWKEFILKEE NSPEYVEKIT GVLASQIKEA ARLYAKAEKG SIYYGLGITE
HTQGTTAVYA LANLAMITGN VGREGTGVNP LRGQNNVQGS NDMGSFPHDL SGYRHVSDQA
TRKLFEEAWN VDIDPEPGLR IQDMLQLAID GKFKGIYLHG FDLVQSLTDT NYVIEALKSM
ELVVVHDLFL NETAKYAHVF IPGCSFLEKE GTFTNAERRV QLLKKVIKPM CDKQEWEVFC
EIARVMGYDI SYQNSQEIME EISKLTLTYN GITYEKLEKF GGIQWPCNEN APYGTPTLHK
DGFLIGKGKF FITGYIPSKE KISSNYPLIL TTGRNLFQYN VGTNTRRTFN INFYKEDILE
INPMDAKAKN IKDGDYVRLK GENGSIVIKA KITERVSPGV VFSTFHFPET KTNVLTKNNF
DWATLCPEYK FTAVDVEPIE KPISESEPEL KESGENIIID MANRIGLFFE FYEKEDSIKA
IVDHFKKFWH PLLREKLKQF KDDKALLQIV KEAIEILDSN
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