| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0012 |
|---|
| Symbol | |
|---|
| ID | 6331950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 13141 |
|---|
| End bp | 14127 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 642656292 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_001930217 |
|---|
| Protein GI | 188995966 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGCT ACAAAATAGT CATAGGAATT GATGTATCTA AAAACTCATT CACTGCTACA
GTTTTGTATG ATAACAAGAA AGAAAATTTT GAAGTTAAAT CTGACCCGGT AGAGTTTGAA
ATGAAAGTAA AGCCTTACCT TAAGAAGTTT AAAAAGTCAG ATATGCTTAT CATAATGGAA
CATACGGGAG TTTACCATTT AAAGCTTGCT AATTATCTGT ATGAAAATGG TTATAAAGTA
GCAGTAGTAA ATCCATTTTC AATAAAGAAA TTTATGGAAG CTAAAATGAC AAGAGTTAAA
ACAGATAAAG CTGATTCATT CTTTATTGCA GAATATGGAA GAACGTTTTT CGATGGAGAG
CTTTATAAAC CAAAATCAGA TGTAGAAAAA GAAATAGAAG TAAAACTAAA GATATTGGAA
GACCTACAAC AGCAGCTTAC AATGCTAAGA AACAAAAGAG AATCATTAAC CTATGTACCA
ATGAAAAAAT TGAAAGAGAA TTTAGAATAT TACGATGAGC TAATTAGAAA AATAGAAAAA
AACATAAAAG AACTTGAGAA AGAGATAAAA GAATTGTCTA AGAAGAATTA TCAAGAGGAA
TACAAACTTT TAAAAAGTAT ACCTGGTATA AGTGATAGGA CTATAGGAAT GATAATATCA
GTATATGGAA ATTTTGAAAG ATTTAAGAGT GTAAAAGATA TATCGAGTTT TATAGGAATT
AATCCAAGCC CATATGAAAG TGCAGCATGT GTAAAGAAAA GTGTCCGGAT AAAAAAGATG
GGAAATCCAT ATGCAAGGAA AATATTATAC ATGGCAGCAT TATCAGCAAT AAGGTTTAAC
AAATACTGCA GAGAATTATA CGAAAGATTA GTAAGTAAAG GTAAGGCTAA AAAATTAGCA
TTAGTGGCTG TAGCACATAA GTTATTAAGG CAAGCATATG GTGTATTAAA AAGCAGAAGA
CCATTTGATG AAAATTTTTG TACTTGA
|
|---|
| Protein sequence | MNSYKIVIGI DVSKNSFTAT VLYDNKKENF EVKSDPVEFE MKVKPYLKKF KKSDMLIIME
HTGVYHLKLA NYLYENGYKV AVVNPFSIKK FMEAKMTRVK TDKADSFFIA EYGRTFFDGE
LYKPKSDVEK EIEVKLKILE DLQQQLTMLR NKRESLTYVP MKKLKENLEY YDELIRKIEK
NIKELEKEIK ELSKKNYQEE YKLLKSIPGI SDRTIGMIIS VYGNFERFKS VKDISSFIGI
NPSPYESAAC VKKSVRIKKM GNPYARKILY MAALSAIRFN KYCRELYERL VSKGKAKKLA
LVAVAHKLLR QAYGVLKSRR PFDENFCT
|
|---|
| |