| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0004 |
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| Symbol | |
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| ID | 6332573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 2753 |
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| End bp | 4048 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642656284 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001930209 |
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| Protein GI | 188995958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAAAAAA CAGTTAAAAA AGTAAAAAGA ATAGAAGGGT CTTTAAGAGT TCCATCGGAT
AAATCTATTT CACACAGAGC AATAATTTTA TCTTCATTGG CAGATGGTAC ATCTATTGTA
AAAAACTTTT TAAAGGCTGG TGATACTCTT ACAACTGTAA ACGCATACAG AAAACTTGGG
GTTGAAATAG TAGAAAAAGA AGGTGTTTAT TACGTCCATG GGAAAGGTTT AGATGGGCTG
AAAGAACCTG ATGATCTTCT TGATATGGGA AACTCTGGAA CAACTACAAG ATTAACTCTT
GGAGTATTGG CTGGATTTGA TTTTTTTGCT GCGTTAACAG GTGATGATAG TCTAAGAAAA
AGACCTATGA AAAGGGTAGC AGAGCCACTT TCTAAAATGG GTGCAAAAAT AGATGGAAGA
AAGGATGGTA ATTTACTTCC AATCTCTATA AGAGGTGGAA AGCTTACAGG AATAGATTTT
TTTAATGAAA AAATGTCGGC ACAGGTAAAA TCAGCTATTC TTTTGGCTGG ACTGTTTGCA
AAAGGAGATA CAACAGTTAT AGAACCTGTA ATTTCAAGAG ACCATACAGA AAATATGTTA
AACAGTATGG GAGCATATGT AAGTAGAGAA TTTACAAAAG ACGGATATAG AGTAACTGTC
AAAAAAGCAG ATAAGCTAAA TCCTATACAT ATAAACGTAC CTGCCGACCC ATCTTCGGCG
GCATTTTTTG CAGCTGCAGC ATCAATTATT TCCGGGTCTC ACATAGAATT AAAAGATGTT
TTAATAAATC CAACAAGAGA TGGATTTTTT AGAAAGTTAA AAGAAATGGG GGCTAAGGTT
GAATACAAAA ACAAAAGAGA TGAAGCAGGT GAGATAGTAG CAGATATCTA TATTAGCTAT
CATGAATTAA AAGGTGTAAA AGTAGAGCCT CAAGAAGTTC CTTCAATGAT AGACGAAATT
CCACTGCTTG CAATCATTGC AACTCAAGCA GAAGGAGAAA CGGTAATAAC CGGTGCCCAT
GAGCTTAGAG TAAAAGAAAG CGACAGAATT AAATCAGTAA TAGAAAACTT TAAACGCTTA
GGGCTTGAAG CAGAAGAACT TCCAGATGGT ATGATAATAA GAGGAAAACA GAAAGTAAAA
GGTGGAATCG TAGATTCTTA TAAAGACCAT AGAATAGCAA TGGGCTTTGC AATTCTTGGA
TTAGTAAGTG AAGAAGGAAT TACAATAAAA GATGCTGATT GTGTTTATAT ATCTTACCCG
GAATTTTTTA ACCACTTAGA AAAGGTAAGT AAGTAG
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| Protein sequence | MEKTVKKVKR IEGSLRVPSD KSISHRAIIL SSLADGTSIV KNFLKAGDTL TTVNAYRKLG
VEIVEKEGVY YVHGKGLDGL KEPDDLLDMG NSGTTTRLTL GVLAGFDFFA ALTGDDSLRK
RPMKRVAEPL SKMGAKIDGR KDGNLLPISI RGGKLTGIDF FNEKMSAQVK SAILLAGLFA
KGDTTVIEPV ISRDHTENML NSMGAYVSRE FTKDGYRVTV KKADKLNPIH INVPADPSSA
AFFAAAASII SGSHIELKDV LINPTRDGFF RKLKEMGAKV EYKNKRDEAG EIVADIYISY
HELKGVKVEP QEVPSMIDEI PLLAIIATQA EGETVITGAH ELRVKESDRI KSVIENFKRL
GLEAEELPDG MIIRGKQKVK GGIVDSYKDH RIAMGFAILG LVSEEGITIK DADCVYISYP
EFFNHLEKVS K
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